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BUILD BIN report for HEM on tokay2

This page was generated on 2018-10-17 08:32:11 -0400 (Wed, 17 Oct 2018).

Package 680/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HEM 1.52.0
HyungJun Cho
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/HEM
Branch: RELEASE_3_7
Last Commit: 1888f59
Last Changed Date: 2018-04-30 10:35:00 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: HEM
Version: 1.52.0
Command: rm -rf HEM.buildbin-libdir && mkdir HEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HEM.buildbin-libdir HEM_1.52.0.tar.gz
StartedAt: 2018-10-17 06:30:24 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:31:13 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 48.8 seconds
RetCode: 0
Status:  OK  
PackageFile: HEM_1.52.0.zip
PackageFileSize: 674.4 KiB

Command output

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### Running command:
###
###   rm -rf HEM.buildbin-libdir && mkdir HEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HEM.buildbin-libdir HEM_1.52.0.tar.gz
###
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install for i386

* installing *source* package 'HEM' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c hem.c -o hem.o
hem.c: In function 'onelayerhem':
hem.c:1390:12: warning: variable 'k' set but not used [-Wunused-but-set-variable]
  int i, j, k, m, n;
            ^
hem.c: In function 'chk_prt':
hem.c:1593:16: warning: variable 'l' set but not used [-Wunused-but-set-variable]
   int i, j, k, l;
                ^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o HEM.dll tmp.def hem.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/HEM.buildbin-libdir/HEM/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'HEM'
    finding HTML links ... done
    am.tran                                 html  
    am.tran.half                            html  
    base.ASE.Olig                           html  
    base.PSE.Olig                           html  
    base.error.Olig                         html  
    base.error.Olig.quanOnly                html  
    boot.base.ASE.Olig                      html  
    boot.base.PSE.Olig                      html  
    boot.base.error.Olig                    html  
    fixbound.predict.smooth.spline          html  
    hem                                     html  
    hem.eb.prior                            html  
    hem.fdr                                 html  
    hem.null.no                             html  
    hem.null.one                            html  
    hem.null.two                            html  
    hem.preproc                             html  
    mubcp                                   html  
    nonpar.error.Olig                       html  
    nonpar.no.error.Olig                    html  
    nonpar.rep.error.Olig                   html  
    par.error.Olig                          html  
    par.no.error.Olig                       html  
    par.rep.error.Olig                      html  
    pbrain                                  html  
    permut                                  html  
    quant.norm                              html  
    quant.normal                            html  
    quant.normal2                           html  
    quant.normalize                         html  
    remove.sig.genes                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'HEM' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c hem.c -o hem.o
hem.c: In function 'onelayerhem':
hem.c:1390:12: warning: variable 'k' set but not used [-Wunused-but-set-variable]
  int i, j, k, m, n;
            ^
hem.c: In function 'chk_prt':
hem.c:1593:16: warning: variable 'l' set but not used [-Wunused-but-set-variable]
   int i, j, k, l;
                ^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o HEM.dll tmp.def hem.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/HEM.buildbin-libdir/HEM/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HEM' as HEM_1.52.0.zip
* DONE (HEM)
In R CMD INSTALL
In R CMD INSTALL