Marija Buljan
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/DominoEffect |
| Branch: RELEASE_3_7 |
| Last Commit: 324d10a |
| Last Changed Date: 2018-04-30 10:35:49 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:45:21 -0400 (Wed, 17 Oct 2018).
| Package 404/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DominoEffect 1.0.0 Marija Buljan
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | [ ERROR ] | skipped | skipped | |||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: DominoEffect |
| Version: 1.0.0 |
| Command: chmod a+r DominoEffect -R && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data DominoEffect |
| StartedAt: 2018-10-17 00:01:15 -0400 (Wed, 17 Oct 2018) |
| EndedAt: 2018-10-17 00:01:53 -0400 (Wed, 17 Oct 2018) |
| EllapsedTime: 38.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r DominoEffect -R && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data DominoEffect ### ############################################################################## ############################################################################## * checking for file 'DominoEffect/DESCRIPTION' ... OK * preparing 'DominoEffect': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR There are in total 5 protein residues with 5 or more mutation. ***Checking potential hotspots.*** Obtaining sequences of proteins encoded by the representative Ensembl transcripts. Obtaining UniProtKB sequences and coordinates of protein functional elements. Quitting from lines 61-63 (Vignette.Rmd) Error: processing vignette 'Vignette.Rmd' failed with diagnostics: Retrieving sequence from Uniprot failed: http://www.uniprot.org/uniprot/P50148.gff error: cannot open the connection Execution halted