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INSTALL report for DMCHMM on tokay2

This page was generated on 2018-10-17 08:44:27 -0400 (Wed, 17 Oct 2018).

Package 395/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DMCHMM 1.2.0
Farhad Shokoohi
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/DMCHMM
Branch: RELEASE_3_7
Last Commit: c56801d
Last Changed Date: 2018-04-30 10:35:47 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: DMCHMM
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/DMCHMM_1.2.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.2.0.zip && rm DMCHMM_1.2.0.tar.gz DMCHMM_1.2.0.zip
StartedAt: 2018-10-16 19:54:36 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:55:35 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 59.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/DMCHMM_1.2.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.2.0.zip && rm DMCHMM_1.2.0.tar.gz DMCHMM_1.2.0.zip
###
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100  540k  100  540k    0     0  8263k      0 --:--:-- --:--:-- --:--:-- 9163k

install for i386

* installing *source* package 'DMCHMM' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** help
*** installing help indices
  converting help for package 'DMCHMM'
    finding HTML links ... done
    BSDMCs-class                            html  
    BSData-class                            html  
    finding level-2 HTML links ... done

    DMCHMM-package                          html  
    cBSDMCs-method                          html  
    cBSData-method                          html  
    combine-method                          html  
    data                                    html  
    findDMCs-method                         html  
    manhattanDMCs-method                    html  
    methHMEM-method                         html  
    methHMMCMC-method                       html  
    methLevels-method                       html  
    methReads-method                        html  
    methStates-method                       html  
    params                                  html  
    qqDMCs-method                           html  
    readBismark-method                      html  
    totalReads-method                       html  
    writeBED-method                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
In R CMD INSTALL

install for x64

* installing *source* package 'DMCHMM' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
* MD5 sums
packaged installation of 'DMCHMM' as DMCHMM_1.2.0.zip
* DONE (DMCHMM)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'DMCHMM' successfully unpacked and MD5 sums checked
In R CMD INSTALL