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BUILD BIN report for ComplexHeatmap on tokay2

This page was generated on 2018-10-17 08:40:16 -0400 (Wed, 17 Oct 2018).

Package 296/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ComplexHeatmap 1.18.1
Zuguang Gu
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/ComplexHeatmap
Branch: RELEASE_3_7
Last Commit: be0dd9d
Last Changed Date: 2018-06-19 09:49:32 -0400 (Tue, 19 Jun 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: ComplexHeatmap
Version: 1.18.1
Command: rm -rf ComplexHeatmap.buildbin-libdir && mkdir ComplexHeatmap.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ComplexHeatmap.buildbin-libdir ComplexHeatmap_1.18.1.tar.gz
StartedAt: 2018-10-17 06:11:48 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:12:18 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 30.2 seconds
RetCode: 0
Status:  OK  
PackageFile: ComplexHeatmap_1.18.1.zip
PackageFileSize: 3.001 MiB

Command output

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### Running command:
###
###   rm -rf ComplexHeatmap.buildbin-libdir && mkdir ComplexHeatmap.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ComplexHeatmap.buildbin-libdir ComplexHeatmap_1.18.1.tar.gz
###
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install for i386

* installing *source* package 'ComplexHeatmap' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ComplexHeatmap'
    finding HTML links ... done
    AdditiveUnit-class                      html  
    AdditiveUnit                            html  
    ColorMapping-class                      html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/ColorMapping-class.rd:21: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    ColorMapping                            html  
    ComplexHeatmap-package                  html  
    Heatmap-class                           html  
    Heatmap                                 html  
    HeatmapAnnotation-class                 html  
    HeatmapAnnotation                       html  
    HeatmapList-class                       html  
    HeatmapList                             html  
    Legend                                  html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/Legend.rd:51: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/Legend.rd:48: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    SingleAnnotation-class                  html  
    SingleAnnotation                        html  
    add.AdditiveUnit                        html  
    add_heatmap-Heatmap-method              html  
    add_heatmap-HeatmapAnnotation-method    html  
    add_heatmap-HeatmapList-method          html  
    add_heatmap-dispatch                    html  
    adjust_dend_by_leaf_width               html  
    anno_barplot                            html  
    anno_boxplot                            html  
    anno_density                            html  
    anno_histogram                          html  
    anno_link                               html  
    anno_oncoprint_barplot                  html  
    anno_points                             html  
    anno_text                               html  
    annotation_legend_size-HeatmapList-method
                                            html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/annotation_legend_size-HeatmapList-method.rd:16: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    color_mapping_legend-ColorMapping-method
                                            html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/color_mapping_legend-ColorMapping-method.rd:60: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    columnAnnotation                        html  
    column_anno_barplot                     html  
    column_anno_boxplot                     html  
    column_anno_density                     html  
    column_anno_histogram                   html  
    column_anno_link                        html  
    column_anno_points                      html  
    column_anno_text                        html  
    column_dend-Heatmap-method              html  
    column_dend-HeatmapList-method          html  
    column_dend-dispatch                    html  
    column_order-Heatmap-method             html  
    column_order-HeatmapList-method         html  
    column_order-dispatch                   html  
    component_height-Heatmap-method         html  
    component_height-HeatmapList-method     html  
    component_height-dispatch               html  
    component_width-Heatmap-method          html  
    component_width-HeatmapList-method      html  
    component_width-dispatch                html  
    decorate_annotation                     html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/decorate_annotation.rd:23: file link 'seekViewport' in package 'grid' does not exist and so has been treated as a topic
    decorate_column_dend                    html  
    decorate_column_names                   html  
    decorate_column_title                   html  
    decorate_dend                           html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/decorate_dend.rd:25: file link 'seekViewport' in package 'grid' does not exist and so has been treated as a topic
    decorate_dimnames                       html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/decorate_dimnames.rd:25: file link 'seekViewport' in package 'grid' does not exist and so has been treated as a topic
    decorate_heatmap_body                   html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/decorate_heatmap_body.rd:23: file link 'seekViewport' in package 'grid' does not exist and so has been treated as a topic
    decorate_row_dend                       html  
    decorate_row_names                      html  
    decorate_row_title                      html  
    decorate_title                          html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/decorate_title.rd:25: file link 'seekViewport' in package 'grid' does not exist and so has been treated as a topic
    densityHeatmap                          html  
    dist2                                   html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/dist2.rd:16: file link 'as.dist' in package 'stats' does not exist and so has been treated as a topic
    draw-Heatmap-method                     html  
    draw-HeatmapAnnotation-method           html  
    draw-HeatmapList-method                 html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/draw-HeatmapList-method.rd:43: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/draw-HeatmapList-method.rd:46: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    draw-SingleAnnotation-method            html  
    draw-dispatch                           html  
    draw_annotation-Heatmap-method          html  
    draw_annotation_legend-HeatmapList-method
                                            html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/draw_annotation_legend-HeatmapList-method.rd:16: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    draw_dend-Heatmap-method                html  
    draw_dimnames-Heatmap-method            html  
    draw_heatmap_body-Heatmap-method        html  
    draw_heatmap_legend-HeatmapList-method
                                            html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/draw_heatmap_legend-HeatmapList-method.rd:16: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    draw_heatmap_list-HeatmapList-method    html  
    draw_title-Heatmap-method               html  
    draw_title-HeatmapList-method           html  
    draw_title-dispatch                     html  
    enhanced_basicplot                      html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/enhanced_basicplot.rd:32: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    get_color_mapping_list-HeatmapAnnotation-method
                                            html  
    get_color_mapping_param_list-HeatmapAnnotation-method
                                            html  
    grid.dendrogram                         html  
    grid.dendrogram2                        html  
    heatmap_legend_size-HeatmapList-method
                                            html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/heatmap_legend_size-HeatmapList-method.rd:16: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    ht_global_opt                           html  
    is_abs_unit                             html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/is_abs_unit.rd:19: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    make_column_cluster-Heatmap-method      html  
    make_layout-Heatmap-method              html  
    make_layout-HeatmapList-method          html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/make_layout-HeatmapList-method.rd:53: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/make_layout-HeatmapList-method.rd:56: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    make_layout-dispatch                    html  
    make_row_cluster-Heatmap-method         html  
    map_to_colors-ColorMapping-method       html  
    max_text_height                         html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/max_text_height.rd:15: file link 'textGrob' in package 'grid' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/max_text_height.rd:19: file link 'textGrob' in package 'grid' does not exist and so has been treated as a topic
    max_text_width                          html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/max_text_width.rd:15: file link 'textGrob' in package 'grid' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/max_text_width.rd:19: file link 'textGrob' in package 'grid' does not exist and so has been treated as a topic
    oncoPrint                               html  
    packLegend                              html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpmatXjb/R.INSTALL16c06afe306e/ComplexHeatmap/man/packLegend.rd:20: file link 'grob' in package 'grid' does not exist and so has been treated as a topic
    plotDataFrame                           html  
    prepare-Heatmap-method                  html  
    rowAnnotation                           html  
    row_anno_barplot                        html  
    row_anno_boxplot                        html  
    row_anno_density                        html  
    row_anno_histogram                      html  
    row_anno_link                           html  
    row_anno_points                         html  
    row_anno_text                           html  
    row_dend-Heatmap-method                 html  
    row_dend-HeatmapList-method             html  
    row_dend-dispatch                       html  
    row_order-Heatmap-method                html  
    row_order-HeatmapList-method            html  
    row_order-dispatch                      html  
    selectArea                              html  
    set_component_height-Heatmap-method     html  
    show-ColorMapping-method                html  
    show-Heatmap-method                     html  
    show-HeatmapAnnotation-method           html  
    show-HeatmapList-method                 html  
    show-SingleAnnotation-method            html  
    show-dispatch                           html  
    unify_mat_list                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'ComplexHeatmap' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ComplexHeatmap' as ComplexHeatmap_1.18.1.zip
* DONE (ComplexHeatmap)
In R CMD INSTALL
In R CMD INSTALL