Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:27:30 -0400 (Thu, 12 Apr 2018).
Package 1253/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
scater 1.6.3 Davis McCarthy
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: scater |
Version: 1.6.3 |
Command: cd scater.buildbin-libdir/scater && zip -r ../../scater_1.6.3.zip . & cd ../.. |
StartedAt: 2018-04-12 05:02:24 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 05:02:54 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 29.9 seconds |
RetCode: 0 |
Status: OK |
PackageFile: scater_1.6.3.zip |
PackageFileSize: 15.09 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd scater.buildbin-libdir/scater && zip -r ../../scater_1.6.3.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 51%) adding: data/ (372 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (deflated 7%) adding: data/Rdata.rds (332 bytes security) (stored 0%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 47%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 78%) adding: doc/vignette-dataviz.html (332 bytes security) (deflated 48%) adding: doc/vignette-dataviz.R (332 bytes security) (deflated 73%) adding: doc/vignette-dataviz.Rmd (332 bytes security) (deflated 65%) adding: doc/vignette-intro.html (332 bytes security) (deflated 66%) adding: doc/vignette-intro.R (332 bytes security) (deflated 58%) adding: doc/vignette-intro.Rmd (332 bytes security) (deflated 59%) adding: doc/vignette-qc.html (332 bytes security) (deflated 66%) adding: doc/vignette-qc.R (332 bytes security) (deflated 76%) adding: doc/vignette-qc.Rmd (332 bytes security) (deflated 67%) adding: doc/vignette-quantimport.html (332 bytes security) (deflated 66%) adding: doc/vignette-quantimport.R (332 bytes security) (deflated 65%) adding: doc/vignette-quantimport.Rmd (332 bytes security) (deflated 59%) adding: doc/vignette-transition.html (332 bytes security) (deflated 66%) adding: doc/vignette-transition.R (332 bytes security) (deflated 70%) adding: doc/vignette-transition.Rmd (332 bytes security) (deflated 63%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/barcodes.tsv (332 bytes security) (deflated 73%) adding: extdata/genes.tsv (332 bytes security) (deflated 67%) adding: extdata/matrix.mtx (332 bytes security) (deflated 72%) adding: extdata/reads_1.fastq.gz (332 bytes security) (deflated 0%) adding: extdata/reads_2.fastq.gz (332 bytes security) (deflated 0%) adding: extdata/targets.txt (332 bytes security) (deflated 32%) adding: extdata/test_sceset.rds (332 bytes security) (deflated 0%) adding: extdata/transcripts.idx (332 bytes security) (deflated 48%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 75%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: help/scater.rdb (332 bytes security) (deflated 1%) adding: help/scater.rdx (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 84%) adding: html/accessors.html (332 bytes security) (deflated 63%) adding: html/areSizeFactorsCentred.html (332 bytes security) (deflated 57%) adding: html/arrange.html (332 bytes security) (deflated 54%) adding: html/bootstraps.html (332 bytes security) (deflated 58%) adding: html/calcAverage.html (332 bytes security) (deflated 54%) adding: html/calcIsExprs.html (332 bytes security) (deflated 59%) adding: html/calculateCPM.html (332 bytes security) (deflated 51%) adding: html/calculateFPKM.html (332 bytes security) (deflated 55%) adding: html/calculateQCMetrics.html (332 bytes security) (deflated 70%) adding: html/calculateTPM.html (332 bytes security) (deflated 58%) adding: html/deprecated.html (332 bytes security) (deflated 60%) adding: html/downsampleCounts.html (332 bytes security) (deflated 50%) adding: html/filter.html (332 bytes security) (deflated 54%) adding: html/findImportantPCs.html (332 bytes security) (deflated 60%) adding: html/getBMFeatureAnnos.html (332 bytes security) (deflated 66%) adding: html/isOutlier.html (332 bytes security) (deflated 58%) adding: html/kallisto-wrapper.html (332 bytes security) (deflated 67%) adding: html/multiplot.html (332 bytes security) (deflated 56%) adding: html/mutate.html (332 bytes security) (deflated 52%) adding: html/newSCESet.html (332 bytes security) (deflated 67%) adding: html/nexprs.html (332 bytes security) (deflated 61%) adding: html/normaliseExprs.html (332 bytes security) (deflated 66%) adding: html/normalize.html (332 bytes security) (deflated 64%) adding: html/plotDiffusionMap.html (332 bytes security) (deflated 70%) adding: html/plotExplanatoryVariables.html (332 bytes security) (deflated 63%) adding: html/plotExpression.html (332 bytes security) (deflated 70%) adding: html/plotExprsFreqVsMean.html (332 bytes security) (deflated 64%) adding: html/plotExprsVsTxLength.html (332 bytes security) (deflated 68%) adding: html/plotFeatureData.html (332 bytes security) (deflated 59%) adding: html/plotHighestExprs.html (332 bytes security) (deflated 59%) adding: html/plotMDS.html (332 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(deflated 48%) adding: html/scater_gui.html (332 bytes security) (deflated 50%) adding: html/SCESet.html (332 bytes security) (deflated 57%) adding: html/sc_example_cell_info.html (332 bytes security) (deflated 48%) adding: html/sc_example_counts.html (332 bytes security) (deflated 46%) adding: html/summariseExprsAcrossFeatures.html (332 bytes security) (deflated 61%) adding: html/toSingleCellExperiment.html (332 bytes security) (deflated 55%) adding: INDEX (332 bytes security) (deflated 68%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/scater.dll (332 bytes security) (deflated 66%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/scater.dll (332 bytes security) (deflated 63%) adding: MD5 (332 bytes security) (deflated 48%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 73%) adding: NEWS.Rd (332 bytes security) (deflated 56%) adding: R/ (372 bytes security) (stored 0%) adding: R/scater (332 bytes security) (deflated 41%) adding: R/scater.rdb (332 bytes security) (deflated 16%) adding: R/scater.rdx (332 bytes security) (stored 0%) adding: scater_qc_workflow.graffle (332 bytes security) (stored 0%) adding: scater_qc_workflow.png (332 bytes security) (deflated 10%) adding: scater_sticker.svg (332 bytes security) (deflated 60%) adding: scater_sticker_300dpi.pdf (332 bytes security) (deflated 10%) adding: scater_sticker_300dpi.png (332 bytes security) (deflated 0%) adding: scater_sticker_small.png (332 bytes security) (stored 0%) adding: scater_sticker_web.pdf (332 bytes security) (deflated 10%) adding: server.R (332 bytes security) (deflated 29%) adding: shiny-app.R (332 bytes security) (deflated 16%) adding: sticker_readme.md (332 bytes security) (deflated 39%) adding: ui.R (332 bytes security) (deflated 61%) adding: www/ (372 bytes security) (stored 0%) adding: www/scater_qc_workflow.png (332 bytes security) (deflated 1%)