Xin Wang
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/HTSanalyzeR |
| Branch: RELEASE_3_6 |
| Last Commit: 1f0c5f4 |
| Last Changed Date: 2017-10-30 12:39:30 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:20:19 -0400 (Thu, 12 Apr 2018).
| Package 662/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| HTSanalyzeR 2.30.0 Xin Wang
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: HTSanalyzeR |
| Version: 2.30.0 |
| Command: rm -rf HTSanalyzeR.buildbin-libdir && mkdir HTSanalyzeR.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/HTSanalyzeR_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=HTSanalyzeR.buildbin-libdir --merge-multiarch HTSanalyzeR_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL HTSanalyzeR_2.30.0.zip && rm HTSanalyzeR_2.30.0.tar.gz HTSanalyzeR_2.30.0.zip |
| StartedAt: 2018-04-11 18:42:08 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:43:53 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 104.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf HTSanalyzeR.buildbin-libdir && mkdir HTSanalyzeR.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/HTSanalyzeR_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=HTSanalyzeR.buildbin-libdir --merge-multiarch HTSanalyzeR_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL HTSanalyzeR_2.30.0.zip && rm HTSanalyzeR_2.30.0.tar.gz HTSanalyzeR_2.30.0.zip
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install for i386
* installing *source* package 'HTSanalyzeR' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'
** help
*** installing help indices
converting help for package 'HTSanalyzeR'
finding HTML links ... done
FDRcollectionGsea html
GOGeneSets html
GSCA-class html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/GSCA-class.Rd:112: missing file link 'writeHits'
GenHTSAHtmlRowUnit html
HTSanalyzeR html
HTSanalyzeR4cellHTS2 html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/HTSanalyzeR4cellHTS2.Rd:8: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/HTSanalyzeR4cellHTS2.Rd:9: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/HTSanalyzeR4cellHTS2.Rd:207: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/HTSanalyzeR4cellHTS2.Rd:218: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/HTSanalyzeR4cellHTS2.Rd:218: missing file link 'NWA'
KeggGeneSets html
NWA-class html
aggregatePvals html
analyze html
analyzeGeneSetCollections html
annotationConvertor html
appendGSTerms html
biogridDataDownload html
celAnnotationConvertor html
cellHTS2OutputStatTests html
changes html
collectionGsea html
data-KcViab html
drosoAnnotationConvertor html
duplicateRemover html
getTopGeneSets html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/getTopGeneSets.Rd:10: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/getTopGeneSets.Rd:18: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/getTopGeneSets.Rd:27: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/getTopGeneSets.Rd:28: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/getTopGeneSets.Rd:32: missing file link 'GSCA'
gseaPlots html
gseaScores html
htmlAttrVectorPaste html
hyperGeoTest html
interactome html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/interactome.Rd:10: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/interactome.Rd:13: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/interactome.Rd:23: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/interactome.Rd:28: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/interactome.Rd:69: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/interactome.Rd:81: missing file link 'NWA'
makeGSEAplots html
makeOverlapTable html
mammalAnnotationConvertor html
multiHyperGeoTest html
networkAnalysis html
networkPlot html
pairwiseGsea html
pairwiseGseaPlot html
pairwisePhenoMannWhit html
paraCheck html
permutationPvalueCollectionGsea html
plotEnrichMap html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotEnrichMap.Rd:10: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotEnrichMap.Rd:13: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotEnrichMap.Rd:25: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotEnrichMap.Rd:26: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotEnrichMap.Rd:30: missing file link 'GSCA'
plotGSEA html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotGSEA.Rd:10: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotGSEA.Rd:14: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotGSEA.Rd:24: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotGSEA.Rd:25: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotGSEA.Rd:29: missing file link 'GSCA'
plotSubNet html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotSubNet.Rd:10: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotSubNet.Rd:23: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotSubNet.Rd:24: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/plotSubNet.Rd:28: missing file link 'NWA'
preprocess html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:11: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:11: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:15: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:20: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:30: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:31: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:35: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:35: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:112: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/preprocess.Rd:113: missing file link 'NWA'
report html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:11: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:11: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:15: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:15: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:25: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:25: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:26: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:26: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:30: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:30: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:69: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/report.Rd:70: missing file link 'NWA'
reportAll html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:10: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:10: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:14: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:14: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:24: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:27: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:31: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/reportAll.Rd:31: missing file link 'GSCA'
summarize html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:14: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:14: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:18: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:18: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:28: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:28: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:29: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:29: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:33: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:33: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:44: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/summarize.Rd:49: missing file link 'GSCA'
viewEnrichMap html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewEnrichMap.Rd:10: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewEnrichMap.Rd:13: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewEnrichMap.Rd:24: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewEnrichMap.Rd:25: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewEnrichMap.Rd:29: missing file link 'GSCA'
viewGSEA html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewGSEA.Rd:10: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewGSEA.Rd:14: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewGSEA.Rd:24: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewGSEA.Rd:27: missing file link 'GSCA'
viewSubNet html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewSubNet.Rd:10: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewSubNet.Rd:20: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/viewSubNet.Rd:25: missing file link 'NWA'
writeHTSAHtmlHead html
writeHTSAHtmlSummary html
writeHTSAHtmlTab html
writeHTSAHtmlTable html
writeHTSAHtmlTail html
writeReportHTSA html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/writeReportHTSA.Rd:8: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/writeReportHTSA.Rd:8: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/writeReportHTSA.Rd:17: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/writeReportHTSA.Rd:20: missing file link 'NWA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/writeReportHTSA.Rd:56: missing file link 'GSCA'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpgBRNIX/R.INSTALL12c471763de3/HTSanalyzeR/man/writeReportHTSA.Rd:57: missing file link 'NWA'
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'
In R CMD INSTALL
install for x64
* installing *source* package 'HTSanalyzeR' ...
** testing if installed package can be loaded
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'
* MD5 sums
packaged installation of 'HTSanalyzeR' as HTSanalyzeR_2.30.0.zip
* DONE (HTSanalyzeR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'HTSanalyzeR' successfully unpacked and MD5 sums checked
In R CMD INSTALL