Mikhail Spivakov
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/Chicago |
| Branch: RELEASE_3_6 |
| Last Commit: 1fb7051 |
| Last Changed Date: 2017-10-30 12:41:09 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:27:10 -0400 (Thu, 12 Apr 2018).
| Package 212/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Chicago 1.6.0 Mikhail Spivakov
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: Chicago |
| Version: 1.6.0 |
| Command: rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/Chicago_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=Chicago.buildbin-libdir --merge-multiarch Chicago_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL Chicago_1.6.0.zip && rm Chicago_1.6.0.tar.gz Chicago_1.6.0.zip |
| StartedAt: 2018-04-11 18:24:50 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:26:53 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 123.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/Chicago_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=Chicago.buildbin-libdir --merge-multiarch Chicago_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL Chicago_1.6.0.zip && rm Chicago_1.6.0.tar.gz Chicago_1.6.0.zip
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install for i386
* installing *source* package 'Chicago' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'Chicago'
finding HTML links ... done
Chicago-package html
cdUnitTest html
chicagoData html
chicagoPipeline html
copyCD html
defaultSettings html
estimateBrownianComponent html
estimateDistFun html
estimateTechnicalNoise html
exportResults html
getPvals html
getScores html
getSkOnly html
mergeSamples html
modifySettings html
normaliseBaits html
normaliseOtherEnds html
overlapFragWithFeatures html
finding level-2 HTML links ... done
peakEnrichment4Features html
plotBaits html
plotDistFun html
readAndMerge html
readSample html
setExperiment html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'Chicago' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Chicago' as Chicago_1.6.0.zip
* DONE (Chicago)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'Chicago' successfully unpacked and MD5 sums checked
In R CMD INSTALL