Lihua Julie Zhu
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/ChIPpeakAnno |
| Branch: RELEASE_3_6 |
| Last Commit: 2f73a77 |
| Last Changed Date: 2018-02-15 13:40:03 -0400 (Thu, 15 Feb 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:19:47 -0400 (Thu, 12 Apr 2018).
| Package 219/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ChIPpeakAnno 3.12.7 Lihua Julie Zhu
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: ChIPpeakAnno |
| Version: 3.12.7 |
| Command: rm -rf ChIPpeakAnno.buildbin-libdir && mkdir ChIPpeakAnno.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ChIPpeakAnno_3.12.7.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ChIPpeakAnno.buildbin-libdir --merge-multiarch ChIPpeakAnno_3.12.7.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ChIPpeakAnno_3.12.7.zip && rm ChIPpeakAnno_3.12.7.tar.gz ChIPpeakAnno_3.12.7.zip |
| StartedAt: 2018-04-11 18:51:06 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:53:12 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 125.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf ChIPpeakAnno.buildbin-libdir && mkdir ChIPpeakAnno.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ChIPpeakAnno_3.12.7.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ChIPpeakAnno.buildbin-libdir --merge-multiarch ChIPpeakAnno_3.12.7.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ChIPpeakAnno_3.12.7.zip && rm ChIPpeakAnno_3.12.7.tar.gz ChIPpeakAnno_3.12.7.zip
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install for i386
* installing *source* package 'ChIPpeakAnno' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'ChIPpeakAnno'
finding HTML links ... done
BED2RangedData html
ChIPpeakAnno-deprecated html
ChIPpeakAnno-package html
ExonPlusUtr.human.GRCh37 html
GFF2RangedData html
HOT.spots html
IDRfilter html
Peaks.Ste12.Replicate1 html
Peaks.Ste12.Replicate2 html
Peaks.Ste12.Replicate3 html
TSS.human.GRCh37 html
TSS.human.GRCh38 html
TSS.human.NCBI36 html
TSS.mouse.GRCm38 html
TSS.mouse.NCBIM37 html
TSS.rat.RGSC3.4 html
TSS.rat.Rnor_5.0 html
TSS.zebrafish.Zv8 html
TSS.zebrafish.Zv9 html
addAncestors html
addGeneIDs html
addMetadata html
annoGR html
annoPeaks html
annotatePeakInBatch html
annotatedPeak html
assignChromosomeRegion html
bdp html
binOverFeature html
binOverGene html
binOverRegions html
bindist html
condenseMatrixByColnames html
convert2EntrezID html
countPatternInSeqs html
cumulativePercentage html
egOrgMap html
enrichedGO html
estFragmentLength html
estLibSize html
featureAlignedDistribution html
featureAlignedExtentSignal html
featureAlignedHeatmap html
featureAlignedSignal html
findEnhancers html
findOverlappingPeaks html
findOverlapsOfPeaks html
findVennCounts html
getAllPeakSequence html
getAnnotation html
getEnrichedGO html
getEnrichedPATH html
getGeneSeq html
getUniqueGOidCount html
getVennCounts html
hyperGtest html
makeVennDiagram html
mergePlusMinusPeaks html
myPeakList html
oligoFrequency html
oligoSummary html
peakPermTest html
peaksNearBDP html
permPool html
pie1 html
plotBinOverRegions html
preparePool html
reCenterPeaks html
summarizeOverlapsByBins html
summarizePatternInPeaks html
tileCount html
tileGRanges html
toGRanges html
translatePattern html
wgEncodeTfbsV3 html
write2FASTA html
xget html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'ChIPpeakAnno' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ChIPpeakAnno' as ChIPpeakAnno_3.12.7.zip
* DONE (ChIPpeakAnno)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'ChIPpeakAnno' successfully unpacked and MD5 sums checked
In R CMD INSTALL