Zhenyu Xu
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/tilingArray |
| Branch: RELEASE_3_6 |
| Last Commit: fafde4e |
| Last Changed Date: 2017-10-30 12:39:04 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:17:47 -0400 (Thu, 12 Apr 2018).
| Package 1398/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| tilingArray 1.56.0 Zhenyu Xu
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: tilingArray |
| Version: 1.56.0 |
| Command: rm -rf tilingArray.buildbin-libdir && mkdir tilingArray.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/tilingArray_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=tilingArray.buildbin-libdir --merge-multiarch tilingArray_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL tilingArray_1.56.0.zip && rm tilingArray_1.56.0.tar.gz tilingArray_1.56.0.zip |
| StartedAt: 2018-04-11 18:33:08 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:34:26 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 77.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf tilingArray.buildbin-libdir && mkdir tilingArray.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/tilingArray_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=tilingArray.buildbin-libdir --merge-multiarch tilingArray_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL tilingArray_1.56.0.zip && rm tilingArray_1.56.0.tar.gz tilingArray_1.56.0.zip
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install for i386
* installing *source* package 'tilingArray' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=generic -c findsegments.c -o findsegments.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=generic -c sampleStep.c -o sampleStep.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o tilingArray.dll tmp.def findsegments.o sampleStep.o -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/tilingArray.buildbin-libdir/tilingArray/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'tilingArray'
finding HTML links ... done
PMindex html
breakpointsPretend html
class-segmentation html
comparisonPlot html
costMatrix html
findsegments html
gffSub html
normalizeByReference html
otherStrand html
plotAlongChrom html
plotAlongChromLegend html
plotFeatures html
plotSegmentationDots html
plotSegmentationHeatmap html
plotpenLL html
posMin html
qcPlots html
readCel2eSet html
sampleStep html
segChrom html
segment html
segnf html
tilingArray-package html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'tilingArray' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=generic -c findsegments.c -o findsegments.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=generic -c sampleStep.c -o sampleStep.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o tilingArray.dll tmp.def findsegments.o sampleStep.o -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/tilingArray.buildbin-libdir/tilingArray/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'tilingArray' as tilingArray_1.56.0.zip
* DONE (tilingArray)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'tilingArray' successfully unpacked and MD5 sums checked
In R CMD INSTALL