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INSTALL report for pcaExplorer on tokay1

This page was generated on 2018-04-12 13:27:56 -0400 (Thu, 12 Apr 2018).

Package 1014/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pcaExplorer 2.4.0
Federico Marini
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/pcaExplorer
Branch: RELEASE_3_6
Last Commit: 8ef4226
Last Changed Date: 2017-10-30 12:41:15 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: pcaExplorer
Version: 2.4.0
Command: rm -rf pcaExplorer.buildbin-libdir && mkdir pcaExplorer.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/pcaExplorer_2.4.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=pcaExplorer.buildbin-libdir --merge-multiarch pcaExplorer_2.4.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL pcaExplorer_2.4.0.zip && rm pcaExplorer_2.4.0.tar.gz pcaExplorer_2.4.0.zip
StartedAt: 2018-04-11 18:46:16 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:47:22 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 65.2 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   rm -rf pcaExplorer.buildbin-libdir && mkdir pcaExplorer.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/pcaExplorer_2.4.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=pcaExplorer.buildbin-libdir --merge-multiarch pcaExplorer_2.4.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL pcaExplorer_2.4.0.zip  && rm pcaExplorer_2.4.0.tar.gz pcaExplorer_2.4.0.zip
###
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100 2692k  100 2692k    0     0  17.3M      0 --:--:-- --:--:-- --:--:-- 17.7M

install for i386

* installing *source* package 'pcaExplorer' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'pcaExplorer'
    finding HTML links ... done
    correlatePCs                            html  
    distro_expr                             html  
    finding level-2 HTML links ... done

    geneprofiler                            html  
    genespca                                html  
    get_annotation                          html  
    get_annotation_orgdb                    html  
    hi_loadings                             html  
    limmaquickpca2go                        html  
    makeExampleDESeqDataSet_multifac        html  
    pair_corr                               html  
    pca2go                                  html  
    pcaExplorer                             html  
    pcaplot                                 html  
    pcaplot3d                               html  
    pcascree                                html  
    plotPCcorrs                             html  
    topGOtable                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'pcaExplorer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pcaExplorer' as pcaExplorer_2.4.0.zip
* DONE (pcaExplorer)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'pcaExplorer' successfully unpacked and MD5 sums checked
In R CMD INSTALL