Alicia Schep
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/chromVAR |
| Branch: RELEASE_3_6 |
| Last Commit: bb0722d |
| Last Changed Date: 2018-04-02 13:48:25 -0400 (Mon, 02 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:30:38 -0400 (Thu, 12 Apr 2018).
| Package 233/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| chromVAR 1.0.2 Alicia Schep
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | WARNINGS | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: chromVAR |
| Version: 1.0.2 |
| Command: cd chromVAR.buildbin-libdir/chromVAR && zip -r ../../chromVAR_1.0.2.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:30:26 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:31:03 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 36.9 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: chromVAR_1.0.2.zip |
| PackageFileSize: 3.973 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd chromVAR.buildbin-libdir/chromVAR && zip -r ../../chromVAR_1.0.2.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 57%) adding: data/ (372 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (deflated 1%) adding: data/Rdata.rds (332 bytes security) (stored 0%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 44%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 59%) adding: doc/Introduction.html (332 bytes security) (deflated 59%) adding: doc/Introduction.R (332 bytes security) (deflated 79%) adding: doc/Introduction.Rmd (332 bytes security) (deflated 64%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/counts_table.tsv (332 bytes security) (deflated 89%) adding: extdata/deviations_test (332 bytes security) (stored 0%) adding: extdata/test_anno1.bed (332 bytes security) (deflated 17%) adding: extdata/test_anno2.bed (332 bytes security) (deflated 51%) adding: extdata/test_anno3.bed (332 bytes security) (deflated 47%) adding: extdata/test_bed.txt (332 bytes security) (deflated 62%) adding: extdata/test_reads.bed (332 bytes security) (deflated 36%) adding: extdata/test_RG.bam (332 bytes security) (stored 0%) adding: extdata/test_single1.bam (332 bytes security) (stored 0%) adding: extdata/test_single2.bam (332 bytes security) (stored 0%) adding: extdata/test_single3.bam (332 bytes security) (stored 0%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 86%) adding: help/chromVAR.rdb (332 bytes security) (deflated 2%) adding: help/chromVAR.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 85%) adding: html/addGCBias.html (332 bytes security) (deflated 59%) adding: html/annotationMatches.html (332 bytes security) (deflated 56%) adding: html/assembleKmers.html (332 bytes security) (deflated 54%) adding: html/cbind-chromVARDeviations-method.html (332 bytes security) (deflated 53%) adding: html/chromVAR.html (332 bytes security) (deflated 45%) adding: html/chromVARDeviations-class.html (332 bytes security) (deflated 51%) adding: html/chromVAR_theme.html (332 bytes security) (deflated 50%) adding: html/computeDeviations.html (332 bytes security) (deflated 75%) adding: html/computeExpectations.html (332 bytes security) (deflated 59%) adding: html/computeVariability.html (332 bytes security) (deflated 56%) adding: html/counts.html (332 bytes security) (deflated 55%) adding: html/deviations.html (332 bytes security) (deflated 51%) adding: html/deviationScores.html (332 bytes security) (deflated 52%) adding: html/deviationsCovariability.html (332 bytes security) (deflated 53%) adding: html/deviationsTsne.html (332 bytes security) (deflated 57%) adding: html/differentialDeviations.html (332 bytes security) (deflated 53%) adding: html/differentialVariability.html (332 bytes security) (deflated 52%) adding: html/example_counts.html (332 bytes security) (deflated 48%) adding: html/filterPeaks.html (332 bytes security) (deflated 57%) adding: html/filterSamples.html (332 bytes security) (deflated 58%) adding: html/filterSamplesPlot.html (332 bytes security) (deflated 60%) adding: html/getAnnotationCorrelation.html (332 bytes security) (deflated 75%) adding: html/getAnnotations.html (332 bytes security) (deflated 66%) adding: html/getAnnotationSynergy.html (332 bytes security) (deflated 75%) adding: html/getBackgroundPeaks.html (332 bytes security) (deflated 62%) adding: html/getCisGroups.html (332 bytes security) (deflated 57%) adding: html/getCounts.html (332 bytes security) (deflated 65%) adding: html/getFragmentsPerPeak.html (332 bytes security) (deflated 56%) adding: html/getFragmentsPerSample.html (332 bytes security) (deflated 56%) adding: html/getJasparMotifs.html (332 bytes security) (deflated 56%) adding: html/getPeaks.html (332 bytes security) (deflated 54%) adding: html/getPermutedData.html (332 bytes security) (deflated 53%) adding: html/getSampleCorrelation.html (332 bytes security) (deflated 54%) adding: html/getSampleDepths.html (332 bytes security) (deflated 61%) adding: html/getSampleDistance.html (332 bytes security) (deflated 56%) adding: html/getTotalFragments.html (332 bytes security) (deflated 56%) adding: html/makeBiasBins.html (332 bytes security) (deflated 60%) adding: html/makePermutedSets.html (332 bytes security) (deflated 74%) adding: html/matchKmers.html (332 bytes security) (deflated 69%) adding: html/mini_counts.html (332 bytes security) (deflated 51%) adding: html/mini_dev.html (332 bytes security) (deflated 53%) adding: html/mini_ix.html (332 bytes security) (deflated 51%) adding: html/plotDeviationsTsne.html (332 bytes security) (deflated 57%) adding: html/plotKmerMismatch.html (332 bytes security) (deflated 52%) adding: html/plotVariability.html (332 bytes security) (deflated 55%) adding: html/pwmDistance.html (332 bytes security) (deflated 54%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/rbind-chromVARDeviations-method.html (332 bytes security) (deflated 53%) adding: html/readNarrowpeaks.html (332 bytes security) (deflated 51%) adding: INDEX (332 bytes security) (deflated 74%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/chromVAR.dll (332 bytes security) (deflated 65%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/chromVAR.dll (332 bytes security) (deflated 65%) adding: LICENSE (332 bytes security) (stored 0%) adding: MD5 (332 bytes security) (deflated 50%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 72%) adding: NEWS (332 bytes security) (deflated 44%) adding: R/ (372 bytes security) (stored 0%) adding: R/chromVAR (332 bytes security) (deflated 41%) adding: R/chromVAR.rdb (332 bytes security) (deflated 17%) adding: R/chromVAR.rdx (332 bytes security) (deflated 1%)