Raffaele A Calogero
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/chimera |
| Branch: RELEASE_3_6 |
| Last Commit: 6d0184a |
| Last Changed Date: 2017-10-30 12:40:00 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:22:33 -0400 (Thu, 12 Apr 2018).
| Package 213/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| chimera 1.20.0 Raffaele A Calogero
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: chimera |
| Version: 1.20.0 |
| Command: cd chimera.buildbin-libdir/chimera && zip -r ../../chimera_1.20.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:29:42 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:30:26 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 44.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: chimera_1.20.0.zip |
| PackageFileSize: 5.61 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd chimera.buildbin-libdir/chimera && zip -r ../../chimera_1.20.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 59%) adding: DESCRIPTION (332 bytes security) (deflated 47%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/chimera.pdf (332 bytes security) (deflated 18%) adding: doc/chimera.R (332 bytes security) (deflated 75%) adding: doc/chimera.Rnw (332 bytes security) (deflated 68%) adding: doc/index.html (332 bytes security) (deflated 58%) adding: examples/ (372 bytes security) (stored 0%) adding: examples/defuse_TP_FP.txt (332 bytes security) (deflated 55%) adding: examples/Edgreen_fm.txt (332 bytes security) (deflated 68%) adding: examples/edgren.stat.detection.txt (332 bytes security) (deflated 70%) adding: examples/Edgren_cs.txt (332 bytes security) (deflated 63%) adding: examples/Edgren_df.tsv (332 bytes security) (deflated 66%) adding: examples/Edgren_true.positives.txt (332 bytes security) (deflated 55%) adding: examples/fset_ARFGEF2-SULF2.rda (332 bytes security) (stored 0%) adding: examples/mcf7.FMFusionReport (332 bytes security) (deflated 62%) adding: examples/mcf7_sample_1.fq (332 bytes security) (deflated 68%) adding: examples/mcf7_sample_2.fq (332 bytes security) (deflated 67%) adding: examples/mcf7_trs_accepted_hits.bam (332 bytes security) (deflated 0%) adding: examples/mcf7_trs_accepted_hits.bam_sorted.bam (332 bytes security) (deflated 0%) adding: examples/mcf7_trs_accepted_hits.bam_sorted.bam.bai (332 bytes security) (deflated 56%) adding: examples/SULF2_ARFGEF2.fa (332 bytes security) (deflated 68%) adding: examples/uc002xtx.4-272_uc010zyd.2-988.fa (332 bytes security) (deflated 62%) adding: examples/uc002xtx.4-272_uc010zyd.2-988_R1.fastq (332 bytes security) (deflated 78%) adding: examples/uc002xtx.4-272_uc010zyd.2-988_R2.fastq (332 bytes security) (deflated 79%) adding: examples/uc002xvp.1-243_uc002iyu.4-1031.fa (332 bytes security) (deflated 63%) adding: examples/uc002xvp.1-243_uc002iyu.4-1031_R1.fastq (332 bytes security) (deflated 80%) adding: examples/uc002xvp.1-243_uc002iyu.4-1031_R2.fastq (332 bytes security) (deflated 80%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 69%) adding: help/chimera.rdb (332 bytes security) (deflated 3%) adding: help/chimera.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 80%) adding: html/bam2fastq.html (332 bytes security) (deflated 58%) adding: html/breakpointOverlaps.html (332 bytes security) (deflated 53%) adding: html/chimera-package.html (332 bytes security) (deflated 63%) adding: html/chimeraSeqs.html (332 bytes security) (deflated 55%) adding: html/chimeraSeqSet.html (332 bytes security) (deflated 54%) adding: html/class.fSet.html (332 bytes security) (deflated 64%) adding: html/defuseTPTN.html (332 bytes security) (deflated 48%) adding: html/filterList.html (332 bytes security) (deflated 64%) adding: html/filterSamReads.html (332 bytes security) (deflated 54%) adding: html/fusionName.html (332 bytes security) (deflated 51%) adding: html/fusionPeptides.html (332 bytes security) (deflated 56%) adding: html/gapfillerInstallation.html (332 bytes security) (deflated 49%) adding: html/gapfillerRun.html (332 bytes security) (deflated 65%) adding: html/gapfillerWrap.html (332 bytes security) (deflated 60%) adding: html/importFusionData.html (332 bytes security) (deflated 58%) adding: html/is.fSet.html (332 bytes security) (deflated 48%) adding: html/MHmakeRandomString.html (332 bytes security) (deflated 47%) adding: html/newfSet.html (332 bytes security) (deflated 60%) adding: html/oncofuseInstallation.html (332 bytes security) (deflated 48%) adding: html/oncofuseRun.html (332 bytes security) (deflated 54%) adding: html/picardInstallation.html (332 bytes security) (deflated 46%) adding: html/plotCoverage.html (332 bytes security) (deflated 64%) adding: html/prettyPrint.html (332 bytes security) (deflated 51%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/removingErrorLine.html (332 bytes security) (deflated 54%) adding: html/starInstallation.html (332 bytes security) (deflated 49%) adding: html/starReads.html (332 bytes security) (deflated 50%) adding: html/starRun.html (332 bytes security) (deflated 61%) adding: html/subreadRun.html (332 bytes security) (deflated 58%) adding: html/supportingReads.html (332 bytes security) (deflated 55%) adding: html/tophatInstallation.html (332 bytes security) (deflated 51%) adding: html/tophatRun.html (332 bytes security) (deflated 59%) adding: html/validateSamFile.html (332 bytes security) (deflated 55%) adding: INDEX (332 bytes security) (deflated 71%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/chimera.dll (332 bytes security) (deflated 65%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/chimera.dll (332 bytes security) (deflated 67%) adding: MD5 (332 bytes security) (deflated 48%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 40%) adding: NEWS (332 bytes security) (deflated 63%) adding: R/ (372 bytes security) (stored 0%) adding: R/chimera (332 bytes security) (deflated 41%) adding: R/chimera.rdb (332 bytes security) (deflated 22%) adding: R/chimera.rdx (332 bytes security) (stored 0%)