Bora Uyar
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/RCAS |
| Branch: RELEASE_3_6 |
| Last Commit: c874cea |
| Last Changed Date: 2018-03-23 11:45:33 -0400 (Fri, 23 Mar 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:28:27 -0400 (Thu, 12 Apr 2018).
| Package 1131/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RCAS 1.4.4 Bora Uyar
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: RCAS |
| Version: 1.4.4 |
| Command: cd RCAS.buildbin-libdir/RCAS && zip -r ../../RCAS_1.4.4.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:59:16 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:59:43 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 26.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: RCAS_1.4.4.zip |
| PackageFileSize: 3.9 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd RCAS.buildbin-libdir/RCAS && zip -r ../../RCAS_1.4.4.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 57%) adding: data/ (372 bytes security) (stored 0%) adding: data/datalist (332 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (deflated 3%) adding: data/Rdata.rds (332 bytes security) (stored 0%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 54%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 68%) adding: doc/RCAS.metaAnalysis.vignette.html (332 bytes security) (deflated 73%) adding: doc/RCAS.metaAnalysis.vignette.R (332 bytes security) (deflated 77%) adding: doc/RCAS.metaAnalysis.vignette.Rmd (332 bytes security) (deflated 63%) adding: doc/RCAS.vignette.html (332 bytes security) (deflated 47%) adding: doc/RCAS.vignette.R (332 bytes security) (deflated 73%) adding: doc/RCAS.vignette.Rmd (332 bytes security) (deflated 66%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/EIF4A3Sauliere20121a.bed (332 bytes security) (deflated 94%) adding: extdata/EIF4A3Sauliere20121b.bed (332 bytes security) (deflated 95%) adding: extdata/FMR1_Ascano2012a_hg19.bed (332 bytes security) (deflated 97%) adding: extdata/FMR1_Ascano2012b_hg19.bed (332 bytes security) (deflated 97%) adding: extdata/FUS_Nakaya2013c_hg19.bed (332 bytes security) (deflated 96%) adding: extdata/FUS_Nakaya2013d_hg19.bed (332 bytes security) (deflated 96%) adding: extdata/hg19.RCASDB.sqlite (332 bytes security) (deflated 77%) adding: extdata/hg19.sample.gtf (332 bytes security) (deflated 94%) adding: extdata/hg19.sample.gtf.granges.rds (332 bytes security) (deflated 1%) adding: extdata/msigdb_test.gmt (332 bytes security) (deflated 62%) adding: extdata/testfile.bed (332 bytes security) (deflated 74%) adding: extdata/testfile2.bed (332 bytes security) (deflated 74%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 71%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: help/RCAS.rdb (332 bytes security) (deflated 2%) adding: help/RCAS.rdx (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 77%) adding: html/calculateCoverageProfile.html (332 bytes security) (deflated 58%) adding: html/calculateCoverageProfileFromTxdb.html (332 bytes security) (deflated 56%) adding: html/calculateCoverageProfileList.html (332 bytes security) (deflated 58%) adding: html/calculateCoverageProfileListFromTxdb.html (332 bytes security) (deflated 56%) adding: html/createControlRegions.html (332 bytes security) (deflated 50%) adding: html/createDB.html (332 bytes security) (deflated 59%) adding: html/createOrthologousGeneSetList.html (332 bytes security) (deflated 56%) adding: html/deleteSampleDataFromDB.html (332 bytes security) (deflated 49%) adding: html/discoverFeatureSpecificMotifs.html (332 bytes security) (deflated 56%) adding: html/extractSequences.html (332 bytes security) (deflated 51%) adding: html/geneSets.html (332 bytes security) (deflated 45%) adding: html/getFeatureBoundaryCoverage.html (332 bytes security) (deflated 59%) adding: html/getFeatureBoundaryCoverageBin.html (332 bytes security) (deflated 58%) adding: html/getFeatureBoundaryCoverageMulti.html (332 bytes security) (deflated 55%) adding: html/getIntervalOverlapMatrix.html (332 bytes security) (deflated 57%) adding: html/getMotifSummaryTable.html (332 bytes security) (deflated 52%) adding: html/getTargetedGenesTable.html (332 bytes security) (deflated 60%) adding: html/getTxdbFeatures.html (332 bytes security) (deflated 47%) adding: html/getTxdbFeaturesFromGRanges.html (332 bytes security) (deflated 49%) adding: html/gff.html (332 bytes security) (deflated 48%) adding: html/importBed.html (332 bytes security) (deflated 55%) adding: html/importBedFiles.html (332 bytes security) (deflated 52%) adding: html/importGtf.html (332 bytes security) (deflated 61%) adding: html/parseMsigdb.html (332 bytes security) (deflated 45%) adding: html/plotFeatureBoundaryCoverage.html (332 bytes security) (deflated 65%) adding: html/printMsigdbDataset.html (332 bytes security) (deflated 55%) adding: html/queryGff.html (332 bytes security) (deflated 51%) adding: html/queryRegions.html (332 bytes security) (deflated 46%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/retrieveOrthologs.html (332 bytes security) (deflated 58%) adding: html/runGSEA.html (332 bytes security) (deflated 55%) adding: html/runMotifRG.html (332 bytes security) (deflated 58%) adding: html/runReport.html (332 bytes security) (deflated 64%) adding: html/runReportMetaAnalysis.html (332 bytes security) (deflated 56%) adding: html/runTopGO.html (332 bytes security) (deflated 56%) adding: html/summarizeDatabaseContent.html (332 bytes security) (deflated 47%) adding: html/summarizeQueryRegions.html (332 bytes security) (deflated 54%) adding: html/summarizeQueryRegionsMulti.html (332 bytes security) (deflated 56%) adding: INDEX (332 bytes security) (deflated 74%) adding: MD5 (332 bytes security) (deflated 50%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 67%) adding: NEWS (332 bytes security) (deflated 58%) adding: R/ (372 bytes security) (stored 0%) adding: R/RCAS (332 bytes security) (deflated 41%) adding: R/RCAS.rdb (332 bytes security) (deflated 1%) adding: R/RCAS.rdx (332 bytes security) (stored 0%) adding: reporting_scripts/ (372 bytes security) (stored 0%) adding: reporting_scripts/footer.html (332 bytes security) (deflated 59%) adding: reporting_scripts/header.html (332 bytes security) (deflated 72%) adding: reporting_scripts/report.Rmd (332 bytes security) (deflated 74%) adding: reporting_scripts/reportMetaAnalysis.Rmd (332 bytes security) (deflated 69%)