Malcolm Perry
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/GenomicInteractions |
| Branch: RELEASE_3_6 |
| Last Commit: 9c6453c |
| Last Changed Date: 2017-10-30 12:40:38 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:25:01 -0400 (Thu, 12 Apr 2018).
| Package 566/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GenomicInteractions 1.12.0 Malcolm Perry
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: GenomicInteractions |
| Version: 1.12.0 |
| Command: cd GenomicInteractions.buildbin-libdir/GenomicInteractions && zip -r ../../GenomicInteractions_1.12.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:41:52 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:42:37 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 45.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: GenomicInteractions_1.12.0.zip |
| PackageFileSize: 8.096 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd GenomicInteractions.buildbin-libdir/GenomicInteractions && zip -r ../../GenomicInteractions_1.12.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: data/ (372 bytes security) (stored 0%) adding: data/hg19.refseq.transcripts.rda (332 bytes security) (stored 0%) adding: data/hic_example_data.rda (332 bytes security) (deflated 0%) adding: data/mm9_refseq_promoters.rda (332 bytes security) (deflated 1%) adding: data/thymus_enhancers.rda (332 bytes security) (deflated 1%) adding: DESCRIPTION (332 bytes security) (deflated 41%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/chiapet_vignette.html (332 bytes security) (deflated 62%) adding: doc/chiapet_vignette.R (332 bytes security) (deflated 74%) adding: doc/chiapet_vignette.rmd (332 bytes security) (deflated 64%) adding: doc/hic_vignette.html (332 bytes security) (deflated 62%) adding: doc/hic_vignette.R (332 bytes security) (deflated 75%) adding: doc/hic_vignette.Rmd (332 bytes security) (deflated 64%) adding: doc/index.html (332 bytes security) (deflated 70%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/k562.rep1.cluster.pet3+.txt (332 bytes security) (deflated 62%) adding: extdata/Seitan2013_WT_100kb_interactions.txt (332 bytes security) (deflated 74%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 81%) adding: help/GenomicInteractions.rdb (332 bytes security) (deflated 2%) adding: help/GenomicInteractions.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 85%) adding: html/annotateAnchors.html (332 bytes security) (deflated 53%) adding: html/annotateInteractions.html (332 bytes security) (deflated 55%) adding: html/annotateRegions.html (332 bytes security) (deflated 53%) adding: html/asBED-GInteractions-method.html (332 bytes security) (deflated 52%) adding: html/availableDisplayPars.html (332 bytes security) (deflated 57%) adding: html/calculateDistances.html (332 bytes security) (deflated 56%) adding: html/categoriseInteractions.html (332 bytes security) (deflated 56%) adding: html/countsBetweenAnchors-methods.html (332 bytes security) (deflated 54%) adding: html/export.bed12.html (332 bytes security) (deflated 55%) adding: html/export.bedpe.html (332 bytes security) (deflated 54%) adding: html/export.chiasig.html (332 bytes security) (deflated 54%) adding: html/export.igraph.html (332 bytes security) (deflated 50%) adding: html/GenomicInteractions-class.html (332 bytes security) (deflated 54%) adding: html/GenomicInteractions-package.html (332 bytes security) (deflated 51%) adding: html/GenomicInteractions.html (332 bytes security) (deflated 65%) adding: html/getters.html (332 bytes security) (deflated 61%) adding: html/get_binom_ligation_threshold.html (332 bytes security) (deflated 55%) adding: html/get_self_ligation_threshold.html (332 bytes security) (deflated 55%) adding: html/GInteractions-subsetByFeatures-methods.html (332 bytes security) (deflated 60%) adding: html/hg19.refseq.transcripts.html (332 bytes security) (deflated 48%) adding: html/hic_example_data.html (332 bytes security) (deflated 46%) adding: html/InteractionHelpers.html (332 bytes security) (deflated 63%) adding: html/InteractionTrack-class.html (332 bytes security) (deflated 58%) adding: html/InteractionTrack.html (332 bytes security) (deflated 62%) adding: html/makeGenomicInteractionsFromFile.html (332 bytes security) (deflated 58%) adding: html/mm9_refseq_promoters.html (332 bytes security) (deflated 47%) adding: html/plotAvgViewpoint.html (332 bytes security) (deflated 58%) adding: html/plotCisTrans.html (332 bytes security) (deflated 53%) adding: html/plotCounts.html (332 bytes security) (deflated 55%) adding: html/plotDists.html (332 bytes security) (deflated 54%) adding: html/plotInteractionAnnotations.html (332 bytes security) (deflated 60%) adding: html/plotSummaryStats.html (332 bytes security) (deflated 56%) adding: html/plotViewpoint.html (332 bytes security) (deflated 55%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/removeDups.html (332 bytes security) (deflated 49%) adding: html/resetAnnotations.html (332 bytes security) (deflated 51%) adding: html/sameStrand.html (332 bytes security) (deflated 46%) adding: html/setters.html (332 bytes security) (deflated 60%) adding: html/sum-GInteractions-method.html (332 bytes security) (deflated 51%) adding: html/summariseByFeaturePairs.html (332 bytes security) (deflated 61%) adding: html/summariseByFeatures.html (332 bytes security) (deflated 59%) adding: html/thymus_enh.html (332 bytes security) (deflated 48%) adding: html/updateObject-GenomicInteractions-method.html (332 bytes security) (deflated 58%) adding: html/viewPoint.html (332 bytes security) (deflated 55%) adding: INDEX (332 bytes security) (deflated 71%) adding: MD5 (332 bytes security) (deflated 50%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 73%) adding: NEWS (332 bytes security) (deflated 51%) adding: R/ (372 bytes security) (stored 0%) adding: R/GenomicInteractions (332 bytes security) (deflated 41%) adding: R/GenomicInteractions.rdb (332 bytes security) (deflated 32%) adding: R/GenomicInteractions.rdx (332 bytes security) (deflated 1%)