Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:27:24 -0400 (Thu, 12 Apr 2018).
Package 575/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
GenVisR 1.8.1 Zachary Skidmore
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | |||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK |
Package: GenVisR |
Version: 1.8.1 |
Command: cd GenVisR.buildbin-libdir/GenVisR && zip -r ../../GenVisR_1.8.1.zip . & cd ../.. |
StartedAt: 2018-04-12 04:42:10 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 04:43:03 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 52.8 seconds |
RetCode: 0 |
Status: OK |
PackageFile: GenVisR_1.8.1.zip |
PackageFileSize: 6.351 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd GenVisR.buildbin-libdir/GenVisR && zip -r ../../GenVisR_1.8.1.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 60%) adding: data/ (372 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (deflated 3%) adding: data/Rdata.rds (332 bytes security) (stored 0%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 50%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/GenVisR_intro.html (332 bytes security) (deflated 45%) adding: doc/GenVisR_intro.R (332 bytes security) (deflated 73%) adding: doc/GenVisR_intro.Rmd (332 bytes security) (deflated 68%) adding: doc/index.html (332 bytes security) (deflated 68%) adding: doc/waterfall_introduction.html (332 bytes security) (deflated 49%) adding: doc/waterfall_introduction.R (332 bytes security) (deflated 77%) adding: doc/waterfall_introduction.Rmd (332 bytes security) (deflated 71%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 75%) adding: help/GenVisR.rdb (332 bytes security) (deflated 3%) adding: help/GenVisR.rdx (332 bytes security) (deflated 1%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 82%) adding: html/brcaMAF.html (332 bytes security) (deflated 43%) adding: html/cnFreq.html (332 bytes security) (deflated 64%) adding: html/cnFreq_buildMain.html (332 bytes security) (deflated 62%) adding: html/cnFreq_qual.html (332 bytes security) (deflated 45%) adding: html/cnSpec.html (332 bytes security) (deflated 64%) adding: html/cnSpec_buildMain.html (332 bytes security) (deflated 62%) adding: html/cnSpec_qual.html (332 bytes security) (deflated 53%) adding: html/cnView.html (332 bytes security) (deflated 64%) adding: html/cnView_buildMain.html (332 bytes security) (deflated 57%) adding: html/cnView_qual.html (332 bytes security) (deflated 56%) adding: html/compIdent.html (332 bytes security) (deflated 57%) adding: html/compIdent_bamRcnt.html (332 bytes security) (deflated 53%) adding: html/compIdent_bamRcnt_qual.html (332 bytes security) (deflated 49%) adding: html/compIdent_buildMain.html (332 bytes security) (deflated 51%) adding: html/compIdent_format.html (332 bytes security) (deflated 48%) adding: html/covBars.html (332 bytes security) (deflated 58%) adding: html/covBars_buildMain.html (332 bytes security) (deflated 58%) adding: html/covBars_qual.html (332 bytes security) (deflated 45%) adding: html/cytoGeno.html (332 bytes security) (deflated 45%) adding: html/genCov.html (332 bytes security) (deflated 67%) adding: html/genCov_alignPlot.html (332 bytes security) (deflated 48%) adding: html/genCov_assign_ggplotGrob_height.html (332 bytes security) (deflated 51%) adding: html/genCov_assign_ggplotGrob_width.html (332 bytes security) (deflated 51%) adding: html/genCov_buildCov.html (332 bytes security) (deflated 55%) adding: html/genCov_buildTrack.html (332 bytes security) (deflated 57%) adding: html/genCov_extr_ggplotGrob_height.html (332 bytes security) (deflated 48%) adding: html/genCov_extr_ggplotGrob_width.html (332 bytes security) (deflated 48%) adding: html/genCov_qual.html (332 bytes security) (deflated 52%) adding: html/genCov_trackViz.html (332 bytes security) (deflated 59%) adding: html/geneViz.html (332 bytes security) (deflated 61%) adding: html/geneViz_buildGene.html (332 bytes security) (deflated 58%) adding: html/geneViz_calcGC.html (332 bytes security) (deflated 50%) adding: html/geneViz_cdsFromTXID.html (332 bytes security) (deflated 47%) adding: html/geneViz_extrCDS.html (332 bytes security) (deflated 52%) adding: html/geneViz_extrUTR.html (332 bytes security) (deflated 52%) adding: html/geneViz_formatCDS.html (332 bytes security) (deflated 52%) adding: html/geneViz_formatUTR.html (332 bytes security) (deflated 52%) adding: html/geneViz_Granges2dataframe.html (332 bytes security) (deflated 49%) adding: html/geneViz_mapCoordSpace.html (332 bytes security) (deflated 52%) adding: html/geneViz_mapCovCoordSpace.html (332 bytes security) (deflated 52%) adding: html/geneViz_mergeRegions.html (332 bytes security) (deflated 54%) adding: html/geneViz_mergeTypeRegions.html (332 bytes security) (deflated 48%) adding: html/geneViz_mergeTypes.html (332 bytes security) (deflated 47%) adding: html/GenVisR.html (332 bytes security) (deflated 39%) adding: html/HCC1395_Germline.html (332 bytes security) (deflated 43%) adding: html/HCC1395_N.html (332 bytes security) 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html/lohSpec_tilePosition.html (332 bytes security) (deflated 49%) adding: html/lohSpec_tileWindow.html (332 bytes security) (deflated 49%) adding: html/lohSpec_windowPosition.html (332 bytes security) (deflated 51%) adding: html/lohView.html (332 bytes security) (deflated 61%) adding: html/lohView_buildMain.html (332 bytes security) (deflated 52%) adding: html/lohView_qual.html (332 bytes security) (deflated 52%) adding: html/lolliplot.html (332 bytes security) (deflated 74%) adding: html/lolliplot_AA2sidechain.html (332 bytes security) (deflated 47%) adding: html/lolliplot_buildMain.html (332 bytes security) (deflated 67%) adding: html/lolliplot_Codon2AA.html (332 bytes security) (deflated 46%) adding: html/lolliplot_constructGene.html (332 bytes security) (deflated 52%) adding: html/lolliplot_DNAconv.html (332 bytes security) (deflated 52%) adding: html/lolliplot_dodgeCoordX.html (332 bytes security) (deflated 61%) adding: html/lolliplot_dodgeCoordY.html (332 bytes security) (deflated 48%) adding: html/lolliplot_fetchDomain.html (332 bytes security) (deflated 51%) adding: html/lolliplot_mutationObs.html (332 bytes security) (deflated 63%) adding: html/lolliplot_qual.html (332 bytes security) (deflated 54%) adding: html/lolliplot_reduceLolli.html (332 bytes security) (deflated 47%) adding: html/lolliplot_transcriptID2codingSeq.html (332 bytes security) (deflated 52%) adding: html/LucCNseg.html (332 bytes security) (deflated 41%) adding: html/multi_align.html (332 bytes security) (deflated 49%) adding: html/multi_buildClin.html (332 bytes security) (deflated 55%) adding: html/multi_chrBound.html (332 bytes security) (deflated 45%) adding: html/multi_cytobandRet.html (332 bytes security) (deflated 45%) adding: html/multi_selectOut.html (332 bytes security) (deflated 52%) adding: html/multi_subsetChr.html (332 bytes security) (deflated 48%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/SNPloci.html (332 bytes security) (deflated 42%) adding: html/TvTi.html (332 bytes security) (deflated 68%) adding: html/TvTi_alignPlot.html (332 bytes security) (deflated 51%) adding: html/TvTi_annoTransTranv.html (332 bytes security) (deflated 48%) adding: html/TvTi_buildMain.html (332 bytes security) (deflated 61%) adding: html/TvTi_calcTransTranvFreq.html (332 bytes security) (deflated 48%) adding: html/TvTi_convMAF.html (332 bytes security) (deflated 46%) adding: html/TvTi_qual.html (332 bytes security) (deflated 54%) adding: html/TvTi_rmIndel.html (332 bytes security) (deflated 45%) adding: html/TvTi_rmMnuc.html (332 bytes security) (deflated 46%) adding: html/waterfall.html (332 bytes security) (deflated 70%) adding: html/waterfall_align.html (332 bytes security) (deflated 60%) adding: html/waterfall_buildGenePrevelance.html (332 bytes security) (deflated 50%) adding: html/waterfall_buildMain.html (332 bytes security) (deflated 62%) adding: html/waterfall_buildMutBurden_A.html (332 bytes security) (deflated 50%) adding: html/waterfall_buildMutBurden_B.html (332 bytes security) (deflated 48%) adding: html/waterfall_build_proportions.html (332 bytes security) (deflated 55%) adding: html/waterfall_calcMutFreq.html (332 bytes security) (deflated 48%) adding: html/waterfall_Custom2anno.html (332 bytes security) (deflated 48%) adding: html/waterfall_geneAlt.html (332 bytes security) (deflated 47%) adding: html/waterfall_geneRecurCutoff.html (332 bytes security) (deflated 48%) adding: html/waterfall_geneSort.html (332 bytes security) (deflated 48%) adding: html/waterfall_hierarchyTRV.html (332 bytes security) (deflated 51%) adding: html/waterfall_MAF2anno.html (332 bytes security) (deflated 47%) adding: html/waterfall_MGI2anno.html (332 bytes security) (deflated 48%) adding: html/waterfall_NA2gene.html (332 bytes security) (deflated 46%) adding: html/waterfall_palette_names.html (332 bytes security) (deflated 53%) adding: html/waterfall_qual.html (332 bytes security) (deflated 55%) adding: 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