Martin Morgan
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/DirichletMultinomial |
| Branch: RELEASE_3_6 |
| Last Commit: 251529f |
| Last Changed Date: 2017-10-30 12:39:40 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:21:47 -0400 (Thu, 12 Apr 2018).
| Package 371/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DirichletMultinomial 1.20.0 Martin Morgan
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: DirichletMultinomial |
| Version: 1.20.0 |
| Command: rm -rf DirichletMultinomial.buildbin-libdir && mkdir DirichletMultinomial.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/DirichletMultinomial_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=DirichletMultinomial.buildbin-libdir --merge-multiarch DirichletMultinomial_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL DirichletMultinomial_1.20.0.zip && rm DirichletMultinomial_1.20.0.tar.gz DirichletMultinomial_1.20.0.zip |
| StartedAt: 2018-04-11 18:20:48 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:22:21 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 92.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf DirichletMultinomial.buildbin-libdir && mkdir DirichletMultinomial.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/DirichletMultinomial_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=DirichletMultinomial.buildbin-libdir --merge-multiarch DirichletMultinomial_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL DirichletMultinomial_1.20.0.zip && rm DirichletMultinomial_1.20.0.tar.gz DirichletMultinomial_1.20.0.zip
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install for i386
* installing *source* package 'DirichletMultinomial' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I/src/include -I/i386/include -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_init_DirichletMultinomial.c -o R_init_DirichletMultinomial.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I/src/include -I/i386/include -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=generic -c dirichlet_fit.c -o dirichlet_fit.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I/src/include -I/i386/include -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=generic -c dirichlet_fit_main.c -o dirichlet_fit_main.o
dirichlet_fit_main.c: In function 'dirichlet_fit_main':
dirichlet_fit_main.c:542:17: warning: variable 'status' set but not used [-Wunused-but-set-variable]
int signum, status;
^
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o DirichletMultinomial.dll tmp.def R_init_DirichletMultinomial.o dirichlet_fit.o dirichlet_fit_main.o -L/i386/lib -lgsl -lgslcblas -lm -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/DirichletMultinomial.buildbin-libdir/DirichletMultinomial/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'DirichletMultinomial'
finding HTML links ... done
DMN-class html
DMNGroup-class html
finding level-2 HTML links ... done
DirichletMultinomial-package html
cvdmngroup html
dataobjects html
dmn html
dmngroup html
fitted html
heatmapdmn html
roc html
util html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'DirichletMultinomial' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I/src/include -I/x64/include -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_init_DirichletMultinomial.c -o R_init_DirichletMultinomial.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I/src/include -I/x64/include -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=generic -c dirichlet_fit.c -o dirichlet_fit.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I/src/include -I/x64/include -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=generic -c dirichlet_fit_main.c -o dirichlet_fit_main.o
dirichlet_fit_main.c: In function 'dirichlet_fit_main':
dirichlet_fit_main.c:542:17: warning: variable 'status' set but not used [-Wunused-but-set-variable]
int signum, status;
^
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o DirichletMultinomial.dll tmp.def R_init_DirichletMultinomial.o dirichlet_fit.o dirichlet_fit_main.o -L/x64/lib -lgsl -lgslcblas -lm -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/DirichletMultinomial.buildbin-libdir/DirichletMultinomial/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DirichletMultinomial' as DirichletMultinomial_1.20.0.zip
* DONE (DirichletMultinomial)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'DirichletMultinomial' successfully unpacked and MD5 sums checked
In R CMD INSTALL