Hendrik Treutler
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/DiffLogo |
| Branch: RELEASE_3_6 |
| Last Commit: 2caa81e |
| Last Changed Date: 2017-10-30 12:40:54 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:26:51 -0400 (Thu, 12 Apr 2018).
| Package 366/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DiffLogo 2.2.0 Hendrik Treutler
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: DiffLogo |
| Version: 2.2.0 |
| Command: cd DiffLogo.buildbin-libdir/DiffLogo && zip -r ../../DiffLogo_2.2.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:34:47 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:35:24 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 37.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: DiffLogo_2.2.0.zip |
| PackageFileSize: 1.993 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd DiffLogo.buildbin-libdir/DiffLogo && zip -r ../../DiffLogo_2.2.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 48%) adding: DESCRIPTION (332 bytes security) (deflated 52%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/DiffLogoBasics.pdf (332 bytes security) (deflated 6%) adding: doc/DiffLogoBasics.R (332 bytes security) (deflated 71%) adding: doc/DiffLogoBasics.Rnw (332 bytes security) (deflated 63%) adding: doc/index.html (332 bytes security) (deflated 59%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/alignments/ (372 bytes security) (stored 0%) adding: extdata/alignments/calamodulin_1.txt (332 bytes security) (deflated 41%) adding: extdata/alignments/calamodulin_2.txt (332 bytes security) (deflated 43%) adding: extdata/alignments/F-box_bacteria.seq.fa (332 bytes security) (deflated 62%) adding: extdata/alignments/F-box_fungi.seq.fa (332 bytes security) (deflated 60%) adding: extdata/alignments/F-box_metazoa.seq.fa (332 bytes security) (deflated 67%) adding: extdata/alignments/F-box_viridiplantae.seq.fa (332 bytes security) (deflated 68%) adding: extdata/alignments/Mad.txt (332 bytes security) (deflated 58%) adding: extdata/alignments/Max.txt (332 bytes security) (deflated 58%) adding: extdata/alignments/Myc.txt (332 bytes security) (deflated 58%) adding: extdata/alignments/phosphorylation_1.txt (332 bytes security) (deflated 46%) adding: extdata/alignments/phosphorylation_2.txt (332 bytes security) (deflated 50%) adding: extdata/alignments/ubiquitination_1.txt (332 bytes security) (deflated 44%) adding: extdata/alignments/ubiquitination_2.txt (332 bytes security) (deflated 61%) adding: extdata/homer/ (372 bytes security) (stored 0%) adding: extdata/homer/c-Myc.motif (332 bytes security) (deflated 50%) adding: extdata/homer/CTCF_SatelliteElement_Zf_CD4.motif (332 bytes security) (deflated 57%) adding: extdata/homer/CTCF_Zf_CD4.motif (332 bytes security) (deflated 61%) adding: extdata/homer/Max.motif (332 bytes security) (deflated 55%) adding: extdata/pfm/ (372 bytes security) (stored 0%) adding: extdata/pfm/ctcf_jaspar.pfm (332 bytes security) (deflated 46%) adding: extdata/pwm/ (372 bytes security) (stored 0%) adding: extdata/pwm/GM12878.pwm (332 bytes security) (deflated 52%) adding: extdata/pwm/H1-hESC.pwm (332 bytes security) (deflated 55%) adding: extdata/pwm/HeLa-S3.pwm (332 bytes security) (deflated 54%) adding: extdata/pwm/HepG2.pwm (332 bytes security) (deflated 58%) adding: extdata/pwm/HUVEC.pwm (332 bytes security) (deflated 52%) adding: extdata/pwm/K562.pwm (332 bytes security) (deflated 53%) adding: extdata/pwm/MCF7.pwm (332 bytes security) (deflated 79%) adding: extdata/pwm/NHEK.pwm (332 bytes security) (deflated 53%) adding: extdata/pwm/ProgFib.pwm (332 bytes security) (deflated 56%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 72%) adding: help/DiffLogo.rdb (332 bytes security) (deflated 2%) adding: help/DiffLogo.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 78%) adding: html/alignPwmSets.html (332 bytes security) (deflated 58%) adding: html/Alphabet.html (332 bytes security) (deflated 51%) adding: html/ASN.html (332 bytes security) (deflated 42%) adding: html/baseDistributionPwm.html (332 bytes security) (deflated 52%) adding: html/calculatePvalue.html (332 bytes security) (deflated 63%) adding: html/createDiffLogoObject.html (332 bytes security) (deflated 63%) adding: html/differenceOfICs.html (332 bytes security) (deflated 53%) adding: html/diffLogo.html (332 bytes security) (deflated 55%) adding: html/diffLogoFromPwm.html (332 bytes security) (deflated 62%) adding: html/diffLogoTable.html (332 bytes security) (deflated 53%) adding: html/diffLogoTableConfiguration.html (332 bytes security) (deflated 65%) adding: html/DNA.html (332 bytes security) (deflated 43%) adding: html/drawDiffLogoTable.html (332 bytes security) (deflated 52%) adding: html/enrichDiffLogoObjectWithPvalues.html (332 bytes security) (deflated 59%) adding: html/enrichDiffLogoTableWithPvalues.html (332 bytes security) (deflated 57%) adding: html/extendPwmsFromAlignmentVector.html (332 bytes security) (deflated 55%) adding: html/FULL_ALPHABET.html (332 bytes security) (deflated 46%) adding: html/getAlphabetFromCharacters.html (332 bytes security) (deflated 52%) adding: html/getAlphabetFromSequences.html (332 bytes security) (deflated 52%) adding: html/getPwmFromAlignment.html (332 bytes security) (deflated 52%) adding: html/getPwmFromAlignmentFile.html (332 bytes security) (deflated 52%) adding: html/getPwmFromFastaFile.html (332 bytes security) (deflated 51%) adding: html/getPwmFromFile.html (332 bytes security) (deflated 49%) adding: html/getPwmFromHomerFile.html (332 bytes security) (deflated 49%) adding: html/getPwmFromPfmOrJasparFile.html (332 bytes security) (deflated 50%) adding: html/getPwmFromPwmFile.html (332 bytes security) (deflated 49%) adding: html/getSequencesFromAlignmentFile.html (332 bytes security) (deflated 52%) adding: html/getSequencesFromFastaFile.html (332 bytes security) (deflated 50%) adding: html/informationContent.html (332 bytes security) (deflated 49%) adding: html/localPwmAlignment.html (332 bytes security) (deflated 58%) adding: html/lossOfAbsICDifferences.html (332 bytes security) (deflated 52%) adding: html/multipleLocalPwmsAlignment.html (332 bytes security) (deflated 58%) adding: html/normalizedDifferenceOfProbabilities.html (332 bytes security) (deflated 54%) adding: html/normalizePWM.html (332 bytes security) (deflated 46%) adding: html/prepareDiffLogoTable.html (332 bytes security) (deflated 52%) adding: html/probabilities.html (332 bytes security) (deflated 48%) adding: html/pwmDivergence.html (332 bytes security) (deflated 53%) adding: html/pwmsDistanceMatrix.html (332 bytes security) (deflated 61%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/reverseAlignmentVector.html (332 bytes security) (deflated 51%) adding: html/RNA.html (332 bytes security) (deflated 43%) adding: html/seqLogo.html (332 bytes security) (deflated 56%) adding: html/shannonDivergence.html (332 bytes security) (deflated 51%) adding: html/sumOfAbsICDifferences.html (332 bytes security) (deflated 53%) adding: html/sumOfAbsProbabilityDifferences.html (332 bytes security) (deflated 53%) adding: html/sumProbabilities.html (332 bytes security) (deflated 49%) adding: html/switchDirection.html (332 bytes security) (deflated 49%) adding: html/twoSetsAveragePwmDivergenceFromAlignmentVector.html (332 bytes security) (deflated 60%) adding: INDEX (332 bytes security) (deflated 72%) adding: MD5 (332 bytes security) (deflated 51%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 64%) adding: R/ (372 bytes security) (stored 0%) adding: R/DiffLogo (332 bytes security) (deflated 41%) adding: R/DiffLogo.rdb (332 bytes security) (deflated 4%) adding: R/DiffLogo.rdx (332 bytes security) (stored 0%)