Jacob Carey
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/CNPBayes |
| Branch: RELEASE_3_6 |
| Last Commit: 1534e14 |
| Last Changed Date: 2017-10-30 12:41:08 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:27:07 -0400 (Thu, 12 Apr 2018).
| Package 263/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CNPBayes 1.8.0 Jacob Carey
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | WARNINGS | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: CNPBayes |
| Version: 1.8.0 |
| Command: cd CNPBayes.buildbin-libdir/CNPBayes && zip -r ../../CNPBayes_1.8.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:31:23 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:32:02 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 38.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: CNPBayes_1.8.0.zip |
| PackageFileSize: 10.39 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd CNPBayes.buildbin-libdir/CNPBayes && zip -r ../../CNPBayes_1.8.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: data/ (372 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (deflated 3%) adding: data/Rdata.rds (332 bytes security) (stored 0%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 48%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/Convergence.pdf (332 bytes security) (deflated 7%) adding: doc/Convergence.R (332 bytes security) (deflated 58%) adding: doc/Convergence.Rmd (332 bytes security) (deflated 48%) adding: doc/FindCNPs.pdf (332 bytes security) (deflated 14%) adding: doc/FindCNPs.R (332 bytes security) (deflated 71%) adding: doc/FindCNPs.Rmd (332 bytes security) (deflated 59%) adding: doc/Implementation.pdf (332 bytes security) (deflated 11%) adding: doc/Implementation.R (332 bytes security) (deflated 75%) adding: doc/Implementation.Rmd (332 bytes security) (deflated 64%) adding: doc/index.html (332 bytes security) (deflated 75%) adding: doc/Overview.pdf (332 bytes security) (deflated 7%) adding: doc/Overview.R (332 bytes security) (deflated 68%) adding: doc/Overview.Rmd (332 bytes security) (deflated 60%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/baf.rds (332 bytes security) (stored 0%) adding: extdata/DeletionModelExample.rds (332 bytes security) (stored 0%) adding: extdata/expr_meth_cn_model.rds (332 bytes security) (deflated 25%) adding: extdata/grl_deletions.rds (332 bytes security) (stored 0%) adding: extdata/hgTables.txt (332 bytes security) (deflated 59%) adding: extdata/mckean_data.rds (332 bytes security) (deflated 42%) adding: extdata/simulated_se.rds (332 bytes security) (deflated 2%) adding: extdata/targeted_seq.txt (332 bytes security) (deflated 53%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 85%) adding: help/CNPBayes.rdb (332 bytes security) (deflated 3%) adding: help/CNPBayes.rdx (332 bytes security) (deflated 1%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 87%) adding: html/batch-method.html (332 bytes security) (deflated 46%) adding: html/BatchModelExample.html (332 bytes security) (deflated 49%) adding: html/bic-method.html (332 bytes security) (deflated 50%) adding: html/burnin-method.html (332 bytes security) (deflated 58%) adding: html/chains-method.html (332 bytes security) (deflated 49%) adding: html/chromosome.html (332 bytes security) (deflated 49%) adding: html/CNPBayes.html (332 bytes security) (deflated 45%) adding: html/collapseBatch-method.html (332 bytes security) (deflated 56%) adding: html/combinePlates-method.html (332 bytes security) (deflated 54%) adding: html/consensusCNP.html (332 bytes security) (deflated 60%) adding: html/CopyNumber-methods.html (332 bytes security) (deflated 60%) adding: html/copyNumber.html (332 bytes security) (deflated 57%) adding: html/Deprecated-classes.html (332 bytes security) (deflated 85%) adding: html/Deprecated-functions.html (332 bytes security) (deflated 76%) adding: html/eta.0-method.html (332 bytes security) (deflated 51%) adding: html/extract-methods.html (332 bytes security) (deflated 59%) adding: html/ggplot-functions.html (332 bytes security) (deflated 64%) adding: html/ggPredictive.html (332 bytes security) (deflated 53%) adding: html/gibbs.html (332 bytes security) (deflated 59%) adding: html/gibbs_all.html (332 bytes security) (deflated 63%) adding: html/gibbs_pooled.html (332 bytes security) (deflated 63%) adding: html/Hyperparameters-class.html (332 bytes security) (deflated 57%) adding: html/Hyperparameters.html (332 bytes security) (deflated 57%) adding: html/HyperparametersBatch-class.html (332 bytes security) (deflated 56%) adding: html/HyperparametersMarginal-class.html (332 bytes security) (deflated 56%) adding: html/HyperparametersMultiBatch-class.html (332 bytes security) (deflated 56%) adding: html/HyperparametersMultiBatch.html (332 bytes security) (deflated 68%) adding: html/HyperparametersSingleBatch-class.html (332 bytes security) (deflated 56%) adding: html/HyperparametersSingleBatch.html (332 bytes security) (deflated 69%) adding: html/hyperParams-method.html (332 bytes security) (deflated 58%) adding: html/iter-method.html (332 bytes security) (deflated 57%) adding: html/k-method.html (332 bytes security) (deflated 52%) adding: html/label_switch.html (332 bytes security) (deflated 50%) adding: html/logBayesFactor.html (332 bytes security) (deflated 48%) adding: html/logPrior-method.html (332 bytes security) (deflated 51%) adding: html/log_lik-method.html (332 bytes security) (deflated 52%) adding: html/m2.0-method.html (332 bytes security) (deflated 51%) adding: html/mapCnProbability.html (332 bytes security) (deflated 46%) adding: html/mapComponents.html (332 bytes security) (deflated 53%) adding: html/mapParams.html (332 bytes security) (deflated 59%) adding: html/mapping.html (332 bytes security) (deflated 60%) adding: html/map_z.html (332 bytes security) (deflated 50%) adding: html/marginalLikelihood-method.html (332 bytes security) (deflated 60%) adding: html/MarginalModelExample.html (332 bytes security) (deflated 50%) adding: html/marginal_lik.html (332 bytes security) (deflated 49%) adding: html/McmcChains-class.html (332 bytes security) (deflated 58%) adding: html/McmcParams-class.html (332 bytes security) (deflated 54%) adding: html/mcmcParams-method.html (332 bytes security) (deflated 57%) adding: html/McmcParams.html (332 bytes security) (deflated 58%) adding: html/MixtureModel-class.html (332 bytes security) (deflated 63%) adding: html/mlParams.html (332 bytes security) (deflated 61%) adding: html/modes-method.html (332 bytes security) (deflated 52%) adding: html/mu-method.html (332 bytes security) (deflated 53%) adding: html/muc.html (332 bytes security) (deflated 48%) adding: html/MultiBatchModel-class.html (332 bytes security) (deflated 63%) adding: html/MultiBatchModel2.html (332 bytes security) (deflated 58%) adding: html/MultiBatchModelExample.html (332 bytes security) (deflated 49%) adding: html/MultiBatchPooledExample.html (332 bytes security) (deflated 50%) adding: html/muMean.html (332 bytes security) (deflated 49%) adding: html/names-methods.html (332 bytes security) (deflated 49%) adding: html/nStarts-method.html (332 bytes security) (deflated 56%) adding: html/nu.0-method.html (332 bytes security) (deflated 50%) adding: html/numberObs-method.html (332 bytes security) (deflated 47%) adding: html/oned-method.html (332 bytes security) (deflated 44%) adding: html/p.html (332 bytes security) (deflated 46%) adding: html/pic.html (332 bytes security) (deflated 49%) adding: html/posteriorPredictive.html (332 bytes security) (deflated 53%) adding: html/posteriorSimulation-method.html (332 bytes security) (deflated 54%) adding: html/posterior_cases.html (332 bytes security) (deflated 57%) adding: html/probCopyNumber.html (332 bytes security) (deflated 54%) adding: html/probz-method.html (332 bytes security) (deflated 49%) adding: html/qInverseTau2.html (332 bytes security) (deflated 58%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/saveBatch.html (332 bytes security) (deflated 48%) adding: html/sigma.html (332 bytes security) (deflated 49%) adding: html/sigma2-method.html (332 bytes security) (deflated 55%) adding: html/sigma2.0-method.html (332 bytes security) (deflated 51%) adding: html/sigmac.html (332 bytes security) (deflated 50%) adding: html/simulateBatchData.html (332 bytes security) (deflated 58%) adding: html/simulateData.html (332 bytes security) (deflated 54%) adding: html/SingleBatchModel-class.html (332 bytes security) (deflated 63%) adding: html/SingleBatchModel2.html (332 bytes security) (deflated 57%) adding: html/SingleBatchModelExample.html (332 bytes security) (deflated 50%) adding: html/tau.html (332 bytes security) (deflated 48%) adding: html/tau2-method.html (332 bytes security) (deflated 56%) adding: html/tauc.html (332 bytes security) (deflated 49%) adding: html/tauMean.html (332 bytes security) (deflated 49%) adding: html/theta-method.html (332 bytes security) (deflated 58%) adding: html/thin-method.html (332 bytes security) (deflated 53%) adding: html/tile-functions.html (332 bytes security) (deflated 57%) adding: html/y-method.html (332 bytes security) (deflated 45%) adding: html/z-method.html (332 bytes security) (deflated 48%) adding: html/zfreq-method.html (332 bytes security) (deflated 50%) adding: INDEX (332 bytes security) (deflated 76%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/CNPBayes.dll (332 bytes security) (deflated 63%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/CNPBayes.dll (332 bytes security) (deflated 62%) adding: MD5 (332 bytes security) (deflated 51%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (deflated 2%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 72%) adding: R/ (372 bytes security) (stored 0%) adding: R/CNPBayes (332 bytes security) (deflated 41%) adding: R/CNPBayes.rdb (332 bytes security) (deflated 31%) adding: R/CNPBayes.rdx (332 bytes security) (deflated 4%) adding: scripts/ (372 bytes security) (stored 0%) adding: scripts/run_simulation.R (332 bytes security) (deflated 52%) adding: scripts/run_simulation_hard.R (332 bytes security) (deflated 56%) adding: scripts/simulate-probes.R (332 bytes security) (deflated 60%) adding: scripts/simulations.r (332 bytes security) (deflated 28%) adding: scripts/summarizedata.r (332 bytes security) (deflated 31%) adding: simulate_cnvs.org (332 bytes security) (deflated 63%) adding: skewnormal_mix.cpp (332 bytes security) (deflated 65%)