|
BiocParallel.Rcheck/tests_i386/test.Rout
R version 3.4.4 (2018-03-15) -- "Someone to Lean On"
Copyright (C) 2018 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> BiocGenerics:::testPackage("BiocParallel")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Timing stopped at: 0 0 0
Error in DEACTIVATED("MPI tests not run on Windows") :
MPI tests not run on Windows
In addition: Warning messages:
1: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
2: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
3: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
4: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
5: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
6: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
7: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
8: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
9: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
10: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Timing stopped at: 0 0 0
Error in DEACTIVATED("MPI tests not run on Windows") :
MPI tests not run on Windows
Warning in MulticoreParam(jobname = "test") :
MulticoreParam() not supported on Windows, use SnowParam()
test_bpiterate_Params
chunks greater than number of workers
ith param
ith param
chunks less than number of workers [1]
ith param
ith param
chunks less than number of workers [2]
ith param
ith param
cleanup
test_bpiterate_Params DONE
test_bpiterate_REDUCE
setup
ith param
no REDUCE
REDUCE
'reduce.in.order' FALSE [1]
'reduce.in.order' FALSE [2]
'reduce.in.order' TRUE [1]
'reduce.in.order' TRUE [2]
cleanup
test_bpiterate_REDUCE DONE
test_bplapply_Params
setup
sqrt
serial
snow
dopar
batchjobs
empty input
serial
snow
dopar
batchjobs
BatchJobs
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
cleanup
test_bplapply_Params DONE
test_bplapply_symbols
setup
serial
snow
dopar
cleanup
test_bplapply_symbols DONE
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
RUNIT TEST PROTOCOL -- Wed Apr 11 22:33:42 2018
***********************************************
Number of test functions: 41
Number of deactivated test functions: 2
Number of errors: 0
Number of failures: 0
1 Test Suite :
BiocParallel RUnit Tests - 41 test functions, 0 errors, 0 failures
Number of test functions: 41
Number of deactivated test functions: 2
Number of errors: 0
Number of failures: 0
>
> proc.time()
user system elapsed
9.75 0.45 49.56
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
|
BiocParallel.Rcheck/tests_x64/test.Rout
R version 3.4.4 (2018-03-15) -- "Someone to Lean On"
Copyright (C) 2018 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> BiocGenerics:::testPackage("BiocParallel")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Timing stopped at: 0 0 0
Error in DEACTIVATED("MPI tests not run on Windows") :
MPI tests not run on Windows
In addition: Warning messages:
1: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
2: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
3: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
4: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
5: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
6: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
7: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
8: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
9: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
10: In result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Timing stopped at: 0 0 0
Error in DEACTIVATED("MPI tests not run on Windows") :
MPI tests not run on Windows
Warning in MulticoreParam(jobname = "test") :
MulticoreParam() not supported on Windows, use SnowParam()
test_bpiterate_Params
chunks greater than number of workers
ith param
ith param
chunks less than number of workers [1]
ith param
ith param
chunks less than number of workers [2]
ith param
ith param
cleanup
test_bpiterate_Params DONE
test_bpiterate_REDUCE
setup
ith param
no REDUCE
REDUCE
'reduce.in.order' FALSE [1]
'reduce.in.order' FALSE [2]
'reduce.in.order' TRUE [1]
'reduce.in.order' TRUE [2]
cleanup
test_bpiterate_REDUCE DONE
test_bplapply_Params
setup
sqrt
serial
snow
dopar
batchjobs
empty input
serial
snow
dopar
batchjobs
BatchJobs
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
cleanup
test_bplapply_Params DONE
test_bplapply_symbols
setup
serial
snow
dopar
cleanup
test_bplapply_symbols DONE
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
RUNIT TEST PROTOCOL -- Wed Apr 11 22:34:30 2018
***********************************************
Number of test functions: 41
Number of deactivated test functions: 2
Number of errors: 0
Number of failures: 0
1 Test Suite :
BiocParallel RUnit Tests - 41 test functions, 0 errors, 0 failures
Number of test functions: 41
Number of deactivated test functions: 2
Number of errors: 0
Number of failures: 0
>
> proc.time()
user system elapsed
13.73 0.59 47.93
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
Error in summary.connection(connection) : invalid connection
Calls: <Anonymous> ... sendData.SOCKnode -> serialize -> summary -> summary.connection
|
