Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:17:05 -0400 (Thu, 12 Apr 2018).
Package 117/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Biobase 2.38.0 Bioconductor Package Maintainer
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: Biobase |
Version: 2.38.0 |
Command: cd Biobase.buildbin-libdir/Biobase && zip -r ../../Biobase_2.38.0.zip . & cd ../.. |
StartedAt: 2018-04-12 04:25:54 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 04:26:33 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 38.9 seconds |
RetCode: 0 |
Status: OK |
PackageFile: Biobase_2.38.0.zip |
PackageFileSize: 4.257 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd Biobase.buildbin-libdir/Biobase && zip -r ../../Biobase_2.38.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 46%) adding: Code/ (372 bytes security) (stored 0%) adding: Code/DESCRIPTION (332 bytes security) (deflated 19%) adding: Code/man/ (372 bytes security) (stored 0%) adding: Code/man/@PKGNAME@.Rd (332 bytes security) (deflated 39%) adding: Code/man/get@PKGNAME@.Rd (332 bytes security) (deflated 40%) adding: Code/R/ (372 bytes security) (stored 0%) adding: Code/R/get@PKGNAME@.R (332 bytes security) (deflated 18%) adding: data/ (372 bytes security) (stored 0%) adding: data/aaMap.R (332 bytes security) (deflated 62%) adding: data/geneCov.R (332 bytes security) (deflated 62%) adding: data/geneCovariate.rda (332 bytes security) (stored 0%) adding: data/geneData.R (332 bytes security) (deflated 57%) adding: data/reporter.rda (332 bytes security) (deflated 1%) adding: data/sample.eSet.R (332 bytes security) (deflated 15%) adding: data/sample.ExpressionSet.rda (332 bytes security) (deflated 0%) adding: data/sample.exprSet.1.R (332 bytes security) (deflated 14%) adding: data/sample.exprSet.R (332 bytes security) (deflated 14%) adding: data/sample.MultiSet.rda (332 bytes security) (stored 0%) adding: data/seD.rda (332 bytes security) (stored 0%) adding: data/SW.rda (332 bytes security) (deflated 0%) adding: DESCRIPTION (332 bytes security) (deflated 47%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/BiobaseDevelopment.pdf (332 bytes security) (deflated 10%) adding: doc/BiobaseDevelopment.R (332 bytes security) (deflated 82%) adding: doc/BiobaseDevelopment.Rnw (332 bytes security) (deflated 69%) adding: doc/esApply.pdf (332 bytes security) (deflated 7%) adding: doc/esApply.R (332 bytes security) (deflated 79%) adding: doc/esApply.Rnw (332 bytes security) (deflated 56%) adding: doc/ExpressionSetIntroduction.pdf (332 bytes security) (deflated 10%) adding: doc/ExpressionSetIntroduction.R (332 bytes security) (deflated 81%) adding: doc/ExpressionSetIntroduction.Rnw (332 bytes security) (deflated 63%) adding: doc/index.html (332 bytes security) (deflated 72%) adding: ExpressionSet/ (372 bytes security) (stored 0%) adding: ExpressionSet/DESCRIPTION (332 bytes security) (deflated 20%) adding: ExpressionSet/man/ (372 bytes security) (stored 0%) adding: ExpressionSet/man/@PKGNAME@.Rd (332 bytes security) (deflated 26%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/exprsData.txt (332 bytes security) (deflated 53%) adding: extdata/pData.txt (332 bytes security) (deflated 57%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 83%) adding: help/Biobase.rdb (332 bytes security) (deflated 1%) adding: help/Biobase.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 91%) adding: html/abstract.html (332 bytes security) (deflated 59%) adding: html/addVig2Menu.html (332 bytes security) (deflated 51%) adding: html/Aggregate.html (332 bytes security) (deflated 53%) adding: html/annotatedDataFrameFrom-methods.html (332 bytes security) (deflated 59%) adding: html/anyMissing.html (332 bytes security) (deflated 51%) adding: html/assayData.html (332 bytes security) (deflated 56%) adding: html/Biobase-package.html (332 bytes security) (deflated 62%) adding: html/cache.html (332 bytes security) (deflated 58%) adding: html/channel.html (332 bytes security) (deflated 53%) adding: html/channelNames.html (332 bytes security) (deflated 57%) adding: html/class.aggregator.html (332 bytes security) (deflated 58%) adding: html/class.AnnotatedDataFrame.html (332 bytes security) (deflated 71%) adding: html/class.AssayData.html (332 bytes security) (deflated 63%) adding: html/class.characterORmiame.html (332 bytes security) (deflated 46%) adding: html/class.container.html (332 bytes security) (deflated 56%) adding: html/class.eSet.html (332 bytes security) (deflated 74%) adding: html/class.ExpressionSet.html (332 bytes security) (deflated 75%) adding: html/class.MIAME.html (332 bytes security) (deflated 71%) adding: html/class.MIAxE.html (332 bytes security) (deflated 54%) adding: html/class.MultiSet.html (332 bytes security) (deflated 75%) adding: html/class.NChannelSet.html (332 bytes security) (deflated 68%) adding: html/class.SnpSet.html (332 bytes security) (deflated 75%) adding: html/class.Versioned.html (332 bytes security) (deflated 63%) adding: html/class.VersionedBiobase.html (332 bytes security) (deflated 59%) adding: html/class.Versions.html (332 bytes security) (deflated 66%) adding: html/class.VersionsNull.html (332 bytes security) (deflated 49%) adding: html/classVersion.html (332 bytes security) (deflated 64%) adding: html/contents.html (332 bytes security) (deflated 53%) adding: html/copyEnv.html (332 bytes security) (deflated 53%) adding: html/copySubstitute.html (332 bytes security) (deflated 64%) adding: html/createPackage.html (332 bytes security) (deflated 59%) adding: html/data.aaMap.html (332 bytes security) (deflated 50%) adding: html/data.geneData.html (332 bytes security) (deflated 48%) adding: html/data.reporter.html (332 bytes security) (deflated 57%) adding: html/data.sample.ExpressionSet.html (332 bytes security) (deflated 49%) adding: html/data.sample.MultiSet.html (332 bytes security) (deflated 46%) adding: html/defunct.html (332 bytes security) (deflated 43%) adding: html/description.html (332 bytes security) (deflated 58%) adding: html/dims.html (332 bytes security) (deflated 49%) adding: html/dumpPackTxt.html (332 bytes security) (deflated 49%) adding: html/esApply.html (332 bytes security) (deflated 59%) adding: html/exprs.html (332 bytes security) (deflated 54%) adding: html/featureData.html (332 bytes security) (deflated 57%) adding: html/featureNames.html (332 bytes security) (deflated 55%) adding: html/getPkgVigs.html (332 bytes security) (deflated 49%) adding: html/internals.html (332 bytes security) (deflated 39%) adding: html/isCurrent.html (332 bytes security) (deflated 58%) adding: html/isUnique.html (332 bytes security) (deflated 49%) adding: html/isVersioned.html (332 bytes security) (deflated 57%) adding: html/lcSuffix.html (332 bytes security) (deflated 60%) adding: html/listLen.html (332 bytes security) (deflated 50%) adding: html/makeDataPackage.html (332 bytes security) (deflated 62%) adding: html/matchpt.html (332 bytes security) (deflated 54%) adding: html/multiassign.html (332 bytes security) (deflated 59%) adding: html/note.html (332 bytes security) (deflated 48%) adding: html/notes.html (332 bytes security) (deflated 53%) adding: html/openPDF.html (332 bytes security) (deflated 49%) adding: html/openVignette.html (332 bytes security) (deflated 53%) adding: html/package.version.html (332 bytes security) (deflated 52%) adding: html/phenoData.html (332 bytes security) (deflated 58%) adding: html/protocolData.html (332 bytes security) (deflated 55%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/read.AnnotatedDataFrame.html (332 bytes security) (deflated 63%) adding: html/read.MIAME.html (332 bytes security) (deflated 54%) adding: html/readExpressionSet.html (332 bytes security) (deflated 71%) adding: html/reverseSplit.html (332 bytes security) (deflated 51%) adding: html/rowMedians.html (332 bytes security) (deflated 60%) adding: html/rowQ.html (332 bytes security) (deflated 54%) adding: html/ScalarObject-class.html (332 bytes security) (deflated 50%) adding: html/selectChannels.html (332 bytes security) (deflated 53%) adding: html/selectSome.html (332 bytes security) (deflated 52%) adding: html/snpCall.html (332 bytes security) (deflated 54%) adding: html/storageMode.html (332 bytes security) (deflated 55%) adding: html/strbreak.html (332 bytes security) (deflated 54%) adding: html/subListExtract.html (332 bytes security) (deflated 58%) adding: html/testBioCConnection.html (332 bytes security) (deflated 47%) adding: html/updateObjectTo.html (332 bytes security) (deflated 59%) adding: html/updateOldESet.html (332 bytes security) (deflated 56%) adding: html/userQuery.html (332 bytes security) (deflated 53%) adding: html/validMsg.html (332 bytes security) (deflated 51%) adding: INDEX (332 bytes security) (deflated 68%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/Biobase.dll (332 bytes security) (deflated 57%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/Biobase.dll (332 bytes security) (deflated 58%) adding: MD5 (332 bytes security) (deflated 56%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (deflated 1%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 64%) adding: NEWS (332 bytes security) (deflated 67%) adding: R/ (372 bytes security) (stored 0%) adding: R/Biobase (332 bytes security) (deflated 41%) adding: R/Biobase.rdb (332 bytes security) (deflated 31%) adding: R/Biobase.rdx (332 bytes security) (deflated 4%) adding: scripts/ (372 bytes security) (stored 0%) adding: scripts/esetTesting.R (332 bytes security) (deflated 49%) adding: scripts/getBioC.R (332 bytes security) (deflated 67%) adding: scripts/getBioCHelp (332 bytes security) (deflated 54%) adding: scripts/getBioCPkgNames.R (332 bytes security) (deflated 56%) adding: scripts/makeExpressionSetPackage.R (332 bytes security) (deflated 52%) adding: scripts/query.packages.R (332 bytes security) (deflated 75%) adding: testClass.R (332 bytes security) (deflated 44%) adding: unitTests/ (372 bytes security) (stored 0%) adding: unitTests/test_AnnotatedDataFrame.R (332 bytes security) (deflated 77%) adding: unitTests/test_AssayData.R (332 bytes security) (deflated 70%) adding: unitTests/test_cache.R (332 bytes security) (deflated 69%) adding: unitTests/test_checkClass.R (332 bytes security) (deflated 24%) adding: unitTests/test_combine.R (332 bytes security) (deflated 63%) adding: unitTests/test_copyEnv.R (332 bytes security) (deflated 48%) adding: unitTests/test_DataClasses.R (332 bytes security) (deflated 45%) adding: unitTests/test_esApply.R (332 bytes security) (deflated 82%) adding: unitTests/test_EsetSubclasses.R (332 bytes security) (deflated 80%) adding: unitTests/test_ExpressionSet.R (332 bytes security) (deflated 77%) adding: unitTests/test_NChannelSet.R (332 bytes security) (deflated 83%) adding: unitTests/test_SnpSet.R (332 bytes security) (deflated 62%) adding: unitTests/test_subListExtract.R (332 bytes security) (deflated 70%) adding: unitTests/test_unsaveSetSlot.R (332 bytes security) (deflated 73%) adding: unitTests/test_UpdateObject.R (332 bytes security) (deflated 77%) adding: unitTests/test_VersionedClass.R (332 bytes security) (deflated 76%) adding: unitTests/utilities.R (332 bytes security) (deflated 60%) adding: unitTests/VersionedClass_data/ (372 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/1.8/ (372 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/1.8/AnnotatedDataFrame.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/1.8/ExpressionSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/1.8/exprSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/1.8/MIAME.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/1.8/phenoData.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/ (372 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/aggregator.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/AnnotatedDataFrame.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/container.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/ExpressionSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/exprSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/MIAME.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/MultiSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/phenoData.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/ScalarCharacter.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/SnpSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/Versioned.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/VersionedBiobase.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/Versions.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/2.0/VersionsNull.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/ (372 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/aggregator.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/AnnotatedDataFrame.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/bbsym.rda (332 bytes security) (deflated 0%) adding: unitTests/VersionedClass_data/devel/container.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/eset.rda (332 bytes security) (deflated 0%) adding: unitTests/VersionedClass_data/devel/ExpressionSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/exprSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/golubMergeSub.rda (332 bytes security) (deflated 2%) adding: unitTests/VersionedClass_data/devel/MIAME.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/MultiSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/NChannelSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/sample.eSet.rda (332 bytes security) (deflated 2%) adding: unitTests/VersionedClass_data/devel/sample.exprSet.1.rda (332 bytes security) (deflated 0%) adding: unitTests/VersionedClass_data/devel/sample.exprSet.rda (332 bytes security) (deflated 1%) adding: unitTests/VersionedClass_data/devel/ScalarCharacter.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/ScalarInteger.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/ScalarLogical.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/ScalarNumeric.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/SnpSet.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/SWPD.rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/swrep.rda (332 bytes security) (deflated 76%) adding: unitTests/VersionedClass_data/devel/Versioned.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/VersionedBiobase.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/Versions.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/devel/VersionsNull.Rda (332 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/raw/ (372 bytes security) (stored 0%) adding: unitTests/VersionedClass_data/raw/exprs.tab (332 bytes security) (deflated 58%) adding: unitTests/VersionedClass_data/raw/pData.tab (332 bytes security) (deflated 66%) adding: unitTests/VersionedClass_data/raw/varMetadata.tab (332 bytes security) (deflated 42%)