Package: AnnotationDbi

Version: 1.40.0

Command: rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/AnnotationDbi_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=AnnotationDbi.buildbin-libdir --merge-multiarch AnnotationDbi_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.40.0.zip && rm AnnotationDbi_1.40.0.tar.gz AnnotationDbi_1.40.0.zip

StartedAt: 2018-04-11 18:21:52 -0400 (Wed, 11 Apr 2018)

EndedAt: 2018-04-11 18:25:59 -0400 (Wed, 11 Apr 2018)

EllapsedTime: 246.6 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/AnnotationDbi_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=AnnotationDbi.buildbin-libdir --merge-multiarch AnnotationDbi_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.40.0.zip  && rm AnnotationDbi_1.40.0.tar.gz AnnotationDbi_1.40.0.zip
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install for i386

* installing *source* package 'AnnotationDbi' ...
** R
** inst
** preparing package for lazy loading
in method for 'initialize' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'toString' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'show' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'rev' with signature '"L2Rlink"': no definition for class "L2Rlink"
Creating a new generic function for 'packageName' in package 'AnnotationDbi'
Creating a generic function for 'ls' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'eapply' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'exists' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'sample' from package 'base' in package 'AnnotationDbi'
** help
*** installing help indices
  converting help for package 'AnnotationDbi'
    finding HTML links ... done
    AnnDbObj-class                          html  
    AnnDbPkg-checker                        html  
    AnnotationDb-class                      html  
    AnnotationDbi-internals                 html  
    Bimap-direction                         html  
    Bimap-envirAPI                          html  
    Bimap-keys                              html  
    Bimap-toTable                           html  
    Bimap                                   html  
    BimapFiltering                          html  
    BimapFormatting                         html  
    GOColsAndKeytypes                       html  
    GOFrame                                 html  
    GOTerms-class                           html  
    InparanoidColsAndKeytypes               html  
    KEGGFrame                               html  
    colsAndKeytypes                         html  
    createSimpleBimap                       html  
    inpIDMapper                             html  
    makeGOGraph                             html  
    make_eg_to_go_map                       html  
    orgPackageName                          html  
    print.probetable                        html  
    toSQLStringSet                          html  
    unlist2                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'AnnotationDbi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AnnotationDbi' as AnnotationDbi_1.40.0.zip
* DONE (AnnotationDbi)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'AnnotationDbi' successfully unpacked and MD5 sums checked
In R CMD INSTALL