Jesper R Gadin
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/AllelicImbalance |
| Branch: RELEASE_3_6 |
| Last Commit: 85f652a |
| Last Changed Date: 2017-10-30 12:40:08 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:23:24 -0400 (Thu, 12 Apr 2018).
| Package 35/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| AllelicImbalance 1.16.0 Jesper R Gadin
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | WARNINGS | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: AllelicImbalance |
| Version: 1.16.0 |
| Command: cd AllelicImbalance.buildbin-libdir/AllelicImbalance && zip -r ../../AllelicImbalance_1.16.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:22:47 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:23:31 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 44.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: AllelicImbalance_1.16.0.zip |
| PackageFileSize: 2.381 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd AllelicImbalance.buildbin-libdir/AllelicImbalance && zip -r ../../AllelicImbalance_1.16.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 54%) adding: data/ (372 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (deflated 11%) adding: data/Rdata.rds (332 bytes security) (stored 0%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 53%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/AllelicImbalance-vignette.pdf (332 bytes security) (deflated 26%) adding: doc/AllelicImbalance-vignette.R (332 bytes security) (deflated 70%) adding: doc/AllelicImbalance-vignette.Rmd (332 bytes security) (deflated 65%) adding: doc/index.html (332 bytes security) (deflated 62%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/ERP000101_subset/ (372 bytes security) (stored 0%) adding: extdata/ERP000101_subset/ERP000101.bcf (332 bytes security) (stored 0%) adding: extdata/ERP000101_subset/ERP000101.bcf.bci (332 bytes security) (deflated 48%) adding: extdata/ERP000101_subset/ERP000101.vcf (332 bytes security) (deflated 68%) adding: extdata/ERP000101_subset/ERR009097.bam (332 bytes security) (deflated 0%) adding: extdata/ERP000101_subset/ERR009097.bam.bai (332 bytes security) (deflated 100%) adding: extdata/ERP000101_subset/ERR009102.bam (332 bytes security) (stored 0%) adding: extdata/ERP000101_subset/ERR009102.bam.bai (332 bytes security) (deflated 100%) adding: extdata/ERP000101_subset/ERR009103.bam (332 bytes security) (stored 0%) adding: extdata/ERP000101_subset/ERR009103.bam.bai (332 bytes security) (deflated 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html/decorateWithGenes.html (332 bytes security) (deflated 58%) adding: html/defaultMapBias.html (332 bytes security) (deflated 52%) adding: html/defaultPhase.html (332 bytes security) (deflated 50%) adding: html/detectAI.html (332 bytes security) (deflated 61%) adding: html/DetectedAI-class.html (332 bytes security) (deflated 60%) adding: html/DetectedAI-plot.html (332 bytes security) (deflated 67%) adding: html/DetectedAI-summary.html (332 bytes security) (deflated 60%) adding: html/fractionPlotDf.html (332 bytes security) (deflated 55%) adding: html/gba.html (332 bytes security) (deflated 54%) adding: html/genomatrix.html (332 bytes security) (deflated 43%) adding: html/genotype2phase.html (332 bytes security) (deflated 54%) adding: html/getAlleleCounts.html (332 bytes security) (deflated 58%) adding: html/getAlleleQuality.html (332 bytes security) (deflated 57%) adding: html/getAreaFromGeneNames.html (332 bytes security) (deflated 58%) adding: html/getDefaultMapBiasExpMean.html (332 bytes security) (deflated 54%) adding: html/getSnpIdFromLocation.html (332 bytes security) (deflated 56%) adding: html/GlobalAnalysis-class.html (332 bytes security) (deflated 51%) adding: html/GRvariants.html (332 bytes security) (deflated 45%) adding: html/histplot.html (332 bytes security) (deflated 52%) adding: html/implodeList-old.html (332 bytes security) (deflated 48%) adding: html/import-bam-2.html (332 bytes security) (deflated 54%) adding: html/import-bam.html (332 bytes security) (deflated 55%) adding: html/import-bcf.html (332 bytes security) (deflated 56%) adding: html/inferAlleles.html (332 bytes security) (deflated 58%) adding: html/inferAltAllele.html (332 bytes security) (deflated 54%) adding: html/inferGenotypes.html (332 bytes security) (deflated 57%) adding: html/initialize-ASEset.html (332 bytes security) (deflated 68%) adding: html/initialize-DetectedAI.html (332 bytes security) (deflated 67%) adding: html/initialize-GlobalAnalysis.html (332 bytes security) (deflated 49%) adding: html/initialize-RiskVariant.html (332 bytes security) (deflated 51%) adding: html/legendBarplot.html (332 bytes security) (deflated 64%) adding: html/LinkVariantAlmlof-class.html (332 bytes security) (deflated 50%) adding: html/LinkVariantAlmlof-plot.html (332 bytes security) (deflated 54%) adding: html/locationplot.html (332 bytes security) (deflated 64%) adding: html/lva.html (332 bytes security) (deflated 61%) adding: html/lva.internal.html (332 bytes security) (deflated 57%) adding: html/makeMaskedFasta.html (332 bytes security) (deflated 56%) adding: html/mapBiasRef.html (332 bytes security) (deflated 50%) adding: html/minCountFilt.html (332 bytes security) (deflated 57%) adding: html/minFreqFilt.html (332 bytes security) (deflated 56%) adding: html/multiAllelicFilt.html (332 bytes security) (deflated 56%) adding: html/phase2genotype.html (332 bytes security) (deflated 57%) adding: html/phaseArray2phaseMatrix.html (332 bytes security) (deflated 54%) adding: html/phaseMatrix2Array.html (332 bytes security) (deflated 54%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/randomRef.html (332 bytes security) (deflated 52%) adding: html/reads.html (332 bytes security) (deflated 42%) adding: html/refAllele.html (332 bytes security) (deflated 49%) adding: html/RegionSummary-class.html (332 bytes security) (deflated 52%) adding: html/regionSummary.html (332 bytes security) (deflated 56%) adding: html/RiskVariant-class.html (332 bytes security) (deflated 58%) adding: html/scanForHeterozygotes-old.html (332 bytes security) (deflated 58%) adding: INDEX (332 bytes security) (deflated 70%) adding: MD5 (332 bytes security) (deflated 56%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (deflated 2%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds 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