MADSEQ 1.3.1 Yu Kong
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017) | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MADSEQ | Last Changed Rev: 129288 / Revision: 131943 | Last Changed Date: 2017-04-29 17:06:33 -0400 (Sat, 29 Apr 2017) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | |
tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | |
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd MADSEQ.buildbin-libdir/MADSEQ && zip -r ../../MADSEQ_1.3.1.zip . & cd ../..
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adding: data/ (372 bytes security) (stored 0%)
adding: data/Rdata.rdb (332 bytes security) (deflated 0%)
adding: data/Rdata.rds (332 bytes security) (deflated 1%)
adding: data/Rdata.rdx (332 bytes security) (stored 0%)
adding: DESCRIPTION (332 bytes security) (deflated 43%)
adding: doc/ (372 bytes security) (stored 0%)
adding: doc/index.html (332 bytes security) (deflated 59%)
adding: doc/MADSEQ-vignette.html (332 bytes security) (deflated 55%)
adding: doc/MADSEQ-vignette.R (332 bytes security) (deflated 75%)
adding: doc/MADSEQ-vignette.Rmd (332 bytes security) (deflated 70%)
adding: extdata/ (372 bytes security) (stored 0%)
adding: extdata/aneuploidy.bam (332 bytes security) (deflated 0%)
adding: extdata/aneuploidy.bam.bai (332 bytes security) (deflated 98%)
adding: extdata/aneuploidy.vcf.gz (332 bytes security) (stored 0%)
adding: extdata/aneuploidy.vcf.gz.tbi (332 bytes security) (deflated 2%)
adding: extdata/aneuploidy.vcf1.gz (332 bytes security) (stored 0%)
adding: extdata/normal.bam (332 bytes security) (deflated 0%)
adding: extdata/normal.bam.bai (332 bytes security) (deflated 98%)
adding: extdata/normal.vcf.gz (332 bytes security) (stored 0%)
adding: extdata/target.bed (332 bytes security) (deflated 64%)
adding: help/ (372 bytes security) (stored 0%)
adding: help/aliases.rds (332 bytes security) (stored 0%)
adding: help/AnIndex (332 bytes security) (deflated 66%)
adding: help/MADSEQ.rdb (332 bytes security) (deflated 1%)
adding: help/MADSEQ.rdx (332 bytes security) (stored 0%)
adding: help/paths.rds (332 bytes security) (stored 0%)
adding: html/ (372 bytes security) (stored 0%)
adding: html/00Index.html (332 bytes security) (deflated 73%)
adding: html/R.css (332 bytes security) (deflated 75%)
adding: INDEX (332 bytes security) (deflated 62%)
adding: MD5 (332 bytes security) (deflated 46%)
adding: Meta/ (372 bytes security) (stored 0%)
adding: Meta/data.rds (332 bytes security) (stored 0%)
adding: Meta/features.rds (332 bytes security) (stored 0%)
adding: Meta/hsearch.rds (332 bytes security) (stored 0%)
adding: Meta/links.rds (332 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (332 bytes security) (stored 0%)
adding: Meta/package.rds (332 bytes security) (stored 0%)
adding: Meta/Rd.rds (332 bytes security) (stored 0%)
adding: Meta/vignette.rds (332 bytes security) (stored 0%)
adding: NAMESPACE (332 bytes security) (deflated 64%)
adding: NEWS (332 bytes security) (stored 0%)
adding: R/ (372 bytes security) (stored 0%)
adding: R/MADSEQ (332 bytes security) (deflated 41%)
adding: R/MADSEQ.rdb (332 bytes security) (deflated 30%)
adding: R/MADSEQ.rdx (332 bytes security) (stored 0%)
adding: rjags/ (372 bytes security) (stored 0%)
adding: rjags/FourMix.txt (332 bytes security) (deflated 50%)
adding: rjags/LOH.txt (332 bytes security) (deflated 59%)
adding: rjags/OneMix.txt (332 bytes security) (deflated 42%)
adding: rjags/TwoMixMonosomy.txt (332 bytes security) (deflated 51%)
adding: rjags/TwoMixTrisomy.txt (332 bytes security) (deflated 51%)