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BioC 3.6: INSTALL report for DSS on tokay1

This page was generated on 2017-08-16 13:30:34 -0400 (Wed, 16 Aug 2017).

Package 375/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DSS 2.18.0
Hao Wu
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/DSS
Last Changed Rev: 131563 / Revision: 131943
Last Changed Date: 2017-07-25 11:42:35 -0400 (Tue, 25 Jul 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  ERROR 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 

Summary

Package: DSS
Version: 2.18.0
Command: rm -rf DSS.buildbin-libdir && mkdir DSS.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/DSS_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=DSS.buildbin-libdir --merge-multiarch DSS_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL DSS_2.18.0.zip && rm DSS_2.18.0.tar.gz DSS_2.18.0.zip
StartedAt: 2017-08-15 18:25:26 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 18:26:11 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 45.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf DSS.buildbin-libdir && mkdir DSS.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/DSS_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=DSS.buildbin-libdir --merge-multiarch DSS_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL DSS_2.18.0.zip  && rm DSS_2.18.0.tar.gz DSS_2.18.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  566k  100  566k    0     0  3863k      0 --:--:-- --:--:-- --:--:-- 3934k

install for i386

* installing *source* package 'DSS' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG     -I"C:/local323/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c compute_var_smooth.c -o compute_var_smooth.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG     -I"C:/local323/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c filter.c -o filter.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG     -I"C:/local323/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c nitem.c -o nitem.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o DSS.dll tmp.def compute_var_smooth.o filter.o nitem.o -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/DSS.buildbin-libdir/DSS/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'DSS' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG     -I"C:/local323/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c compute_var_smooth.c -o compute_var_smooth.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG     -I"C:/local323/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c filter.c -o filter.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG     -I"C:/local323/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c nitem.c -o nitem.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o DSS.dll tmp.def compute_var_smooth.o filter.o nitem.o -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/DSS.buildbin-libdir/DSS/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DSS' as DSS_2.18.0.zip
* DONE (DSS)
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'DSS' successfully unpacked and MD5 sums checked