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### Running command:
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### cd systemPipeR.buildbin-libdir/systemPipeR && zip -r ../../systemPipeR_1.10.0.zip . & cd ../..
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adding: DESCRIPTION (264 bytes security) (deflated 46%)
adding: doc/ (304 bytes security) (stored 0%)
adding: doc/index.html (264 bytes security) (deflated 80%)
adding: doc/systemPipeChIPseq.pdf (264 bytes security) (deflated 11%)
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adding: doc/systemPipeR.R (264 bytes security) (deflated 77%)
adding: doc/systemPipeR.Rmd (264 bytes security) (deflated 71%)
adding: doc/systemPipeRIBOseq.pdf (264 bytes security) (deflated 16%)
adding: doc/systemPipeRIBOseq.R (264 bytes security) (deflated 76%)
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adding: doc/systemPipeRNAseq.pdf (264 bytes security) (deflated 14%)
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adding: doc/systemPipeVARseq.R (264 bytes security) (deflated 81%)
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adding: extdata/ (304 bytes security) (stored 0%)
adding: extdata/.BatchJobs.R (264 bytes security) (deflated 19%)
adding: extdata/alignStats.xls (264 bytes security) (deflated 62%)
adding: extdata/annotate_peaks.param (264 bytes security) (deflated 44%)
adding: extdata/annotate_vars.param (264 bytes security) (deflated 43%)
adding: extdata/bowtiePE.param (264 bytes security) (deflated 42%)
adding: extdata/bowtieSE.param (264 bytes security) (deflated 41%)
adding: extdata/bwa.param (264 bytes security) (deflated 43%)
adding: extdata/countDFeByg.xls (264 bytes security) (deflated 61%)
adding: extdata/count_rangesets.param (264 bytes security) (deflated 44%)
adding: extdata/custom_Fct.R (264 bytes security) (deflated 58%)
adding: extdata/filter_gatk.param (264 bytes security) (deflated 43%)
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adding: extdata/filter_vartools.param (264 bytes security) (deflated 43%)
adding: extdata/gatk.param (264 bytes security) (deflated 50%)
adding: extdata/gatk_run.sh (264 bytes security) (deflated 61%)
adding: extdata/gsnap.param (264 bytes security) (deflated 43%)
adding: extdata/macs2.param (264 bytes security) (deflated 45%)
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adding: extdata/Makefile (264 bytes security) (deflated 62%)
adding: extdata/rpkmDFeByg.xls (264 bytes security) (deflated 49%)
adding: extdata/rsubread.param (264 bytes security) (deflated 43%)
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adding: extdata/sambcf_run.sh (264 bytes security) (deflated 54%)
adding: extdata/slides/ (304 bytes security) (stored 0%)
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adding: extdata/targets.txt (264 bytes security) (deflated 65%)
adding: extdata/targetsPE.txt (264 bytes security) (deflated 70%)
adding: extdata/targetsPE_chip.txt (264 bytes security) (deflated 69%)
adding: extdata/targets_chip.txt (264 bytes security) (deflated 64%)
adding: extdata/tophat.param (264 bytes security) (deflated 42%)
adding: extdata/torque.tmpl (264 bytes security) (deflated 49%)
adding: extdata/trim.param (264 bytes security) (deflated 43%)
adding: extdata/trimPE.param (264 bytes security) (deflated 49%)
adding: extdata/vartools.param (264 bytes security) (deflated 43%)
adding: extdata/vignette_archive/ (304 bytes security) (stored 0%)
adding: extdata/vignette_archive/systemPipeR.pdf (264 bytes security) (deflated 8%)
adding: extdata/vignette_archive/systemPipeR.R (264 bytes security) (deflated 74%)
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adding: html/R.css (264 bytes security) (deflated 75%)
adding: INDEX (264 bytes security) (deflated 60%)
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adding: NAMESPACE (264 bytes security) (deflated 50%)
adding: NEWS (264 bytes security) (deflated 54%)
adding: R/ (304 bytes security) (stored 0%)
adding: R/systemPipeR (264 bytes security) (deflated 41%)
adding: R/systemPipeR.rdb (264 bytes security) (deflated 9%)
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