qpgraph 2.10.2
Robert Castelo
| Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017) | | URL: https://git.bioconductor.org/packages/qpgraph | | Branch: RELEASE_3_5 | | Last Commit: 3bb032b | | Last Changed Date: 2017-09-01 07:25:20 -0400 (Fri, 01 Sep 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | [ OK ] | OK | OK | OK | |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL qpgraph
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* installing to library ‘/Library/Frameworks/R.framework/Versions/3.4/Resources/library’
* installing *source* package ‘qpgraph’ ...
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking build system type... i686-apple-darwin15.6.0
checking host system type... i686-apple-darwin15.6.0
configure: creating ./config.status
config.status: creating src/Makevars
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include -Wall -g -O2 -Wall -pedantic -fPIC -Wall -g -O2 -c cliquer.c -o cliquer.o
cliquer.c:229:5: warning: implicit declaration of function 'R_ProcessEvents' is invalid in C99 [-Wimplicit-function-declaration]
R_ProcessEvents();
^
1 warning generated.
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include -Wall -g -O2 -Wall -pedantic -fPIC -Wall -g -O2 -c graph.c -o graph.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include -Wall -g -O2 -Wall -pedantic -fPIC -Wall -g -O2 -c qpgraph.c -o qpgraph.o
qpgraph.c:5849:19: warning: expression result unused [-Wunused-value]
int i = edges[k, 0];
^
qpgraph.c:5850:19: warning: expression result unused [-Wunused-value]
int j = edges[k, 1];
^
qpgraph.c:8157:17: warning: unused variable 'm' [-Wunused-variable]
int i,j,k,m;
^
qpgraph.c:8157:15: warning: unused variable 'k' [-Wunused-variable]
int i,j,k,m;
^
qpgraph.c:8286:5: warning: incompatible pointer types assigning to 'Rboolean *' from 'int *' [-Wincompatible-pointer-types]
G = LOGICAL(GR);
^ ˜˜˜˜˜˜˜˜˜˜˜
5 warnings generated.
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include -Wall -g -O2 -Wall -pedantic -fPIC -Wall -g -O2 -c reorder.c -o reorder.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o qpgraph.so cliquer.o graph.o qpgraph.o reorder.o -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.4/Resources/library/qpgraph/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Creating a generic function for ‘det’ from package ‘Matrix’ in package ‘qpgraph’
** help
*** installing help indices
** building package indices
** installing vignettes
‘eQTLnetworks.Rnw’
‘qpTxRegNet.Rnw’
‘qpgraphSimulate.Rnw’
** testing if installed package can be loaded
* DONE (qpgraph)