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BioC 3.5: BUILD report for EWCE on malbec2

This page was generated on 2017-10-18 14:17:26 -0400 (Wed, 18 Oct 2017).

Package 417/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EWCE 1.4.0
Nathan Skene
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/EWCE
Branch: RELEASE_3_5
Last Commit: fcf0634
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded [ ERROR ] skipped 
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded  ERROR  skipped  skipped 
veracruz2 OS X 10.11.6 El Capitan / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: EWCE
Version: 1.4.0
Command: /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data EWCE
StartedAt: 2017-10-17 20:18:46 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 20:19:25 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 38.7 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data EWCE
###
##############################################################################
##############################################################################


* checking for file ‘EWCE/DESCRIPTION’ ... OK
* preparing ‘EWCE’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 138 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 217 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 138 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 50 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 490 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 519 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 332 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 345 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 199 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 221 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 221 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 221 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 413 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 335 rows containing non-finite values (stat_boxplot).
Quitting from lines 238-242 (EWCE.Rmd) 
Error: processing vignette 'EWCE.Rmd' failed with diagnostics:
Invalid attribute(s): percentage_gc_content 
Please use the function 'listAttributes' to get valid attribute names
Execution halted