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BioC 3.5: BUILD report for CopyNumber450k on tokay2

This page was generated on 2017-10-18 14:23:13 -0400 (Wed, 18 Oct 2017).

Package 277/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CopyNumber450k 1.12.0
Simon Papillon-Cavanagh
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/CopyNumber450k
Branch: RELEASE_3_5
Last Commit: 5a8ebd8
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded [ ERROR ] skipped  skipped 
veracruz2 OS X 10.11.6 El Capitan / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: CopyNumber450k
Version: 1.12.0
Command: chmod a+r CopyNumber450k -R && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CopyNumber450k
StartedAt: 2017-10-17 20:05:53 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 20:05:59 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 6.2 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r CopyNumber450k -R && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CopyNumber450k
###
##############################################################################
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* checking for file 'CopyNumber450k/DESCRIPTION' ... OK
* preparing 'CopyNumber450k':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
Warning: running command '"C:/Users/biocbuild/bbs-3.5-bioc/R/bin/x64/Rcmd.exe" INSTALL -l "C:\Users\biocbuild\bbs-3.5-bioc\tmpdir\Rtmpa2Dc0C\Rinst1ab853cf1409" --no-multiarch "C:/Users/biocbuild/bbs-3.5-bioc/tmpdir/Rtmpa2Dc0C/Rbuild1ab84046d9/CopyNumber450k"' had status 1
      -----------------------------------
* installing *source* package 'CopyNumber450k' ...
** R
Error in .install_package_code_files(".", instdir) : 
files in 'C:/Users/biocbuild/bbs-3.5-bioc/tmpdir/Rtmpa2Dc0C/Rbuild1ab84046d9/CopyNumber450k/R' missing from 'Collate' field:
  zzz.R
ERROR: unable to collate and parse R files for package 'CopyNumber450k'
* removing 'C:/Users/biocbuild/bbs-3.5-bioc/tmpdir/Rtmpa2Dc0C/Rinst1ab853cf1409/CopyNumber450k'
      -----------------------------------
ERROR: package installation failed