BadRegionFinder 1.4.0
Sarah Sandmann
| Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017) | | URL: https://git.bioconductor.org/packages/BadRegionFinder | | Branch: RELEASE_3_5 | | Last Commit: b1ae2b5 | | Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd BadRegionFinder.buildbin-libdir/BadRegionFinder && zip -r ../../BadRegionFinder_1.4.0.zip . & cd ../..
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adding: DESCRIPTION (264 bytes security) (deflated 42%)
adding: doc/ (304 bytes security) (stored 0%)
adding: doc/BadRegionFinder.pdf (264 bytes security) (deflated 10%)
adding: doc/BadRegionFinder.R (264 bytes security) (deflated 81%)
adding: doc/BadRegionFinder.Rnw (264 bytes security) (deflated 76%)
adding: doc/index.html (264 bytes security) (deflated 60%)
adding: extdata/ (304 bytes security) (stored 0%)
adding: extdata/BadCoverageChr2;20;0.9;100;0.9.txt (264 bytes security) (deflated 93%)
adding: extdata/BadCoverageGenes20;0.8;100;0.9.txt (264 bytes security) (deflated 49%)
adding: extdata/BadCoverageSummary20;0.8;100;0.9.txt (264 bytes security) (deflated 8%)
adding: extdata/CoverageQuality_Details.png (264 bytes security) (deflated 54%)
adding: extdata/CoverageQuality_Summary_Genes.png (264 bytes security) (deflated 46%)
adding: extdata/regionsOfInterest.bed (264 bytes security) (deflated 41%)
adding: extdata/SampleNames.txt (264 bytes security) (deflated 6%)
adding: extdata/SampleNames2.txt (264 bytes security) (deflated 10%)
adding: extdata/Summary_chr1.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr10.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr11.txt (264 bytes security) (deflated 12%)
adding: extdata/Summary_chr12.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr13.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr14.txt (264 bytes security) (deflated 10%)
adding: extdata/Summary_chr15.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr16.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr17.txt (264 bytes security) (deflated 11%)
adding: extdata/Summary_chr18.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr19.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr2.txt (264 bytes security) (deflated 80%)
adding: extdata/Summary_chr20.txt (264 bytes security) (deflated 12%)
adding: extdata/Summary_chr21.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr22.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr3.txt (264 bytes security) (deflated 11%)
adding: extdata/Summary_chr4.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr5.txt (264 bytes security) (deflated 11%)
adding: extdata/Summary_chr6.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr7.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr8.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chr9.txt (264 bytes security) (deflated 9%)
adding: extdata/Summary_chrMT.txt (264 bytes security) (deflated 10%)
adding: extdata/Summary_chrX.txt (264 bytes security) (deflated 11%)
adding: extdata/Summary_chrY.txt (264 bytes security) (deflated 9%)
adding: extdata/targetRegions.bed (264 bytes security) (deflated 10%)
adding: extdata/targetRegions2.bed (264 bytes security) (deflated 34%)
adding: extdata/Test2_454.bai (264 bytes security) (deflated 100%)
adding: extdata/Test2_454.bam (264 bytes security) (deflated 0%)
adding: extdata/Test2_ion.bai (264 bytes security) (deflated 100%)
adding: extdata/Test2_ion.bam (264 bytes security) (deflated 0%)
adding: extdata/Test_454.bai (264 bytes security) (deflated 99%)
adding: extdata/Test_454.bam (264 bytes security) (deflated 0%)
adding: extdata/Test_ion.bai (264 bytes security) (deflated 99%)
adding: extdata/Test_ion.bam (264 bytes security) (stored 0%)
adding: help/ (304 bytes security) (stored 0%)
adding: help/aliases.rds (264 bytes security) (stored 0%)
adding: help/AnIndex (264 bytes security) (deflated 77%)
adding: help/BadRegionFinder.rdb (264 bytes security) (deflated 2%)
adding: help/BadRegionFinder.rdx (264 bytes security) (stored 0%)
adding: help/paths.rds (264 bytes security) (stored 0%)
adding: html/ (304 bytes security) (stored 0%)
adding: html/00Index.html (264 bytes security) (deflated 79%)
adding: html/R.css (264 bytes security) (deflated 75%)
adding: INDEX (264 bytes security) (deflated 68%)
adding: MD5 (264 bytes security) (deflated 48%)
adding: Meta/ (304 bytes security) (stored 0%)
adding: Meta/features.rds (264 bytes security) (stored 0%)
adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
adding: Meta/links.rds (264 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
adding: Meta/package.rds (264 bytes security) (stored 0%)
adding: Meta/Rd.rds (264 bytes security) (stored 0%)
adding: Meta/vignette.rds (264 bytes security) (stored 0%)
adding: NAMESPACE (264 bytes security) (deflated 60%)
adding: NEWS (264 bytes security) (stored 0%)
adding: R/ (304 bytes security) (stored 0%)
adding: R/BadRegionFinder (264 bytes security) (deflated 41%)
adding: R/BadRegionFinder.rdb (264 bytes security) (deflated 1%)
adding: R/BadRegionFinder.rdx (264 bytes security) (stored 0%)