BioC 3.5: BUILD BIN report for plw on oaxaca

Package: plw

Version: 1.35.0

Command: rm -rf plw.buildbin-libdir && mkdir plw.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh plw_1.35.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R plw.buildbin-libdir

StartedAt: 2017-03-04 12:03:14 -0800 (Sat, 04 Mar 2017)

EndedAt: 2017-03-04 12:03:41 -0800 (Sat, 04 Mar 2017)

EllapsedTime: 26.6 seconds

RetCode: 0

Status:  OK

PackageFile: plw_1.35.0.tgz

PackageFileSize: 779.2 KiB

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf plw.buildbin-libdir && mkdir plw.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh plw_1.35.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R plw.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=plw.buildbin-libdir plw_1.35.0.tar.gz'
>>>>>>> 

* installing *source* package ‘plw’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG   -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include   -fPIC  -Wall -mtune=core2 -g -O2  -c SpecialFunctions.c -o SpecialFunctions.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG   -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include   -fPIC  -Wall -mtune=core2 -g -O2  -c SpecialOptim.c -o SpecialOptim.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o plw.so SpecialFunctions.o SpecialOptim.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.5-bioc/meat/plw.buildbin-libdir/plw/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (plw)


>>>>>>> 
>>>>>>> FIXING LINKS FOR plw.buildbin-libdir/plw/libs//plw.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgcc_s.1.dylib" "plw.buildbin-libdir/plw/libs//plw.so"
install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "plw.buildbin-libdir/plw/libs//plw.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.5.2.dylib" "plw.buildbin-libdir/plw/libs//plw.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.dylib" "plw.buildbin-libdir/plw/libs//plw.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "plw.buildbin-libdir/plw/libs//plw.so"