XDE 2.22.0
Robert Scharpf
| Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017) | | URL: https://git.bioconductor.org/packages/XDE | | Branch: RELEASE_3_5 | | Last Commit: 25bcec9 | | Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | WARNINGS | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | WARNINGS | [ OK ] | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | WARNINGS | OK | |
##############################################################################
##############################################################################
###
### Running command:
###
### cd XDE.buildbin-libdir/XDE && zip -r ../../XDE_2.22.0.zip . & cd ../..
###
##############################################################################
##############################################################################
adding: CITATION (264 bytes security) (deflated 37%)
adding: data/ (304 bytes security) (stored 0%)
adding: data/expressionSetList.RData (264 bytes security) (deflated 0%)
adding: data/xmcmc.RData (264 bytes security) (deflated 0%)
adding: DESCRIPTION (264 bytes security) (deflated 46%)
adding: doc/ (304 bytes security) (stored 0%)
adding: doc/index.html (264 bytes security) (deflated 67%)
adding: doc/XDE.pdf (264 bytes security) (deflated 13%)
adding: doc/XDE.R (264 bytes security) (deflated 80%)
adding: doc/XDE.Rnw (264 bytes security) (deflated 65%)
adding: doc/XdeParameterClass.pdf (264 bytes security) (deflated 10%)
adding: doc/XdeParameterClass.R (264 bytes security) (deflated 82%)
adding: doc/XdeParameterClass.Rnw (264 bytes security) (deflated 67%)
adding: help/ (304 bytes security) (stored 0%)
adding: help/aliases.rds (264 bytes security) (stored 0%)
adding: help/AnIndex (264 bytes security) (deflated 84%)
adding: help/paths.rds (264 bytes security) (stored 0%)
adding: help/XDE.rdb (264 bytes security) (deflated 2%)
adding: help/XDE.rdx (264 bytes security) (stored 0%)
adding: html/ (304 bytes security) (stored 0%)
adding: html/00Index.html (264 bytes security) (deflated 89%)
adding: html/R.css (264 bytes security) (deflated 75%)
adding: INDEX (264 bytes security) (deflated 67%)
adding: libs/ (304 bytes security) (stored 0%)
adding: libs/i386/ (304 bytes security) (stored 0%)
adding: libs/i386/XDE.dll (264 bytes security) (deflated 64%)
adding: libs/x64/ (304 bytes security) (stored 0%)
adding: libs/x64/XDE.dll (264 bytes security) (deflated 65%)
adding: logFiles/ (304 bytes security) (stored 0%)
adding: logFiles/a.log (264 bytes security) (deflated 71%)
adding: logFiles/b.log (264 bytes security) (deflated 59%)
adding: logFiles/BES.rda (264 bytes security) (stored 0%)
adding: logFiles/c2.log (264 bytes security) (deflated 65%)
adding: logFiles/gamma2.log (264 bytes security) (deflated 65%)
adding: logFiles/l.log (264 bytes security) (deflated 64%)
adding: logFiles/lambda.log (264 bytes security) (deflated 82%)
adding: logFiles/postAvg.rda (264 bytes security) (stored 0%)
adding: logFiles/r.log (264 bytes security) (deflated 66%)
adding: logFiles/rho.log (264 bytes security) (deflated 67%)
adding: logFiles/t.log (264 bytes security) (deflated 64%)
adding: logFiles/tau2R.log (264 bytes security) (deflated 67%)
adding: logFiles/tau2Rho.log (264 bytes security) (deflated 61%)
adding: logFiles/theta.log (264 bytes security) (deflated 63%)
adding: logFiles/xi.log (264 bytes security) (deflated 77%)
adding: MD5 (264 bytes security) (deflated 51%)
adding: Meta/ (304 bytes security) (stored 0%)
adding: Meta/data.rds (264 bytes security) (stored 0%)
adding: Meta/features.rds (264 bytes security) (stored 0%)
adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
adding: Meta/links.rds (264 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
adding: Meta/package.rds (264 bytes security) (stored 0%)
adding: Meta/Rd.rds (264 bytes security) (stored 0%)
adding: Meta/vignette.rds (264 bytes security) (stored 0%)
adding: NAMESPACE (264 bytes security) (deflated 73%)
adding: NEWS (264 bytes security) (deflated 74%)
adding: R/ (304 bytes security) (stored 0%)
adding: R/XDE (264 bytes security) (deflated 41%)
adding: R/XDE.rdb (264 bytes security) (deflated 24%)
adding: R/XDE.rdx (264 bytes security) (deflated 4%)
adding: scripts/ (304 bytes security) (stored 0%)
adding: scripts/ModelA_B.R (264 bytes security) (deflated 70%)
adding: scripts/ModelC_D.R (264 bytes security) (deflated 79%)
adding: scripts/ModelI_II.R (264 bytes security) (deflated 80%)
adding: scripts/v2Interface.R (264 bytes security) (deflated 78%)
adding: Test/ (304 bytes security) (stored 0%)
adding: Test/DESCRIPTION (264 bytes security) (deflated 28%)
adding: Test/man/ (304 bytes security) (stored 0%)
adding: Test/man/Test-package.Rd (264 bytes security) (deflated 48%)
adding: Test/NAMESPACE (264 bytes security) (stored 0%)
adding: Test/R/ (304 bytes security) (stored 0%)
adding: Test/R/initializeParams.R (264 bytes security) (deflated 67%)
adding: Test/R/zzz.R (264 bytes security) (deflated 12%)
adding: Test/src/ (304 bytes security) (stored 0%)
adding: Test/src/Cholesky.cpp (264 bytes security) (deflated 63%)
adding: Test/src/Cholesky.h (264 bytes security) (deflated 55%)
adding: Test/src/diffExpressed_main.cpp (264 bytes security) (deflated 73%)
adding: Test/src/mainTestHyper_v2.cpp (264 bytes security) (deflated 80%)
adding: Test/src/Matrix.h (264 bytes security) (deflated 65%)
adding: Test/src/Matrix_v2.cpp (264 bytes security) (deflated 82%)
adding: Test/src/Matrix_v2.h (264 bytes security) (deflated 74%)
adding: Test/src/Potential.h (264 bytes security) (deflated 49%)
adding: Test/src/PotentialA.h (264 bytes security) (deflated 59%)
adding: Test/src/PotentialB.h (264 bytes security) (deflated 59%)
adding: Test/src/PotentialDDelta.h (264 bytes security) (deflated 66%)
adding: Test/src/PotentialDDeltag.h (264 bytes security) (deflated 65%)
adding: Test/src/PotentialDelta.h (264 bytes security) (deflated 64%)
adding: Test/src/PotentialDeltag.h (264 bytes security) (deflated 62%)
adding: Test/src/PotentialFunction.h (264 bytes security) (deflated 84%)
adding: Test/src/PotentialNu.h (264 bytes security) (deflated 66%)
adding: Test/src/PotentialNug.h (264 bytes security) (deflated 66%)
adding: Test/src/PotentialPhi.h (264 bytes security) (deflated 61%)
adding: Test/src/PotentialPhiqg.h (264 bytes security) (deflated 60%)
adding: Test/src/PotentialR.h (264 bytes security) (deflated 58%)
adding: Test/src/PotentialRho.h (264 bytes security) (deflated 59%)
adding: Test/src/PotentialSigma2.h (264 bytes security) (deflated 62%)
adding: Test/src/PotentialSigma2qg.h (264 bytes security) (deflated 61%)
adding: Test/src/PotentialSum.h (264 bytes security) (deflated 63%)
adding: Test/src/PotentialTau2.h (264 bytes security) (deflated 59%)
adding: Test/src/PotentialX.h (264 bytes security) (deflated 60%)
adding: Test/src/PotentialXi.h (264 bytes security) (deflated 61%)
adding: Test/src/PotentialXqg.h (264 bytes security) (deflated 67%)
adding: Test/src/PotentialZero.h (264 bytes security) (deflated 59%)
adding: Test/src/Potential_v2.cpp (264 bytes security) (deflated 82%)
adding: Test/src/Potential_v2.h (264 bytes security) (deflated 84%)
adding: Test/src/Random.h (264 bytes security) (deflated 77%)
adding: Test/src/Random_v2.cpp (264 bytes security) (deflated 82%)
adding: Test/src/Random_v2.h (264 bytes security) (deflated 83%)
adding: Test/src/Report.h (264 bytes security) (deflated 47%)
adding: Test/src/ReportA.h (264 bytes security) (deflated 59%)
adding: Test/src/ReportAcceptance.h (264 bytes security) (deflated 69%)
adding: Test/src/ReportB.h (264 bytes security) (deflated 59%)
adding: Test/src/ReportC2.h (264 bytes security) (deflated 59%)
adding: Test/src/ReportDDelta.h (264 bytes security) (deflated 62%)
adding: Test/src/ReportDelta.h (264 bytes security) (deflated 62%)
adding: Test/src/ReportDiffexpressed.h (264 bytes security) (deflated 67%)
adding: Test/src/ReportGamma2.h (264 bytes security) (deflated 60%)
adding: Test/src/ReportL.h (264 bytes security) (deflated 59%)
adding: Test/src/ReportLambda.h (264 bytes security) (deflated 61%)
adding: Test/src/ReportNu.h (264 bytes security) (deflated 61%)
adding: Test/src/ReportPhi.h (264 bytes security) (deflated 62%)
adding: Test/src/ReportPotential.h (264 bytes security) (deflated 68%)
adding: Test/src/ReportProbDelta.h (264 bytes security) (deflated 71%)
adding: Test/src/ReportR.h (264 bytes security) (deflated 61%)
adding: Test/src/ReportRho.h (264 bytes security) (deflated 62%)
adding: Test/src/ReportSigma2.h (264 bytes security) (deflated 62%)
adding: Test/src/ReportT.h (264 bytes security) (deflated 59%)
adding: Test/src/ReportTau2R.h (264 bytes security) (deflated 61%)
adding: Test/src/ReportTau2Rho.h (264 bytes security) (deflated 62%)
adding: Test/src/ReportTheta.h (264 bytes security) (deflated 61%)
adding: Test/src/ReportXi.h (264 bytes security) (deflated 60%)
adding: Test/src/Rinterface_v2.cpp (264 bytes security) (deflated 91%)
adding: Test/src/Structure.cpp (264 bytes security) (deflated 86%)
adding: Test/src/Structure.h (264 bytes security) (deflated 76%)
adding: Test/src/Update.h (264 bytes security) (deflated 56%)
adding: Test/src/UpdateAMH.h (264 bytes security) (deflated 74%)
adding: Test/src/UpdateBMH.h (264 bytes security) (deflated 74%)
adding: Test/src/UpdateC2Gibbs.h (264 bytes security) (deflated 76%)
adding: Test/src/UpdateDeltaMH.h (264 bytes security) (deflated 78%)
adding: Test/src/UpdateGamma2Gibbs.h (264 bytes security) (deflated 62%)
adding: Test/src/UpdateLambdaMH.h (264 bytes security) (deflated 62%)
adding: Test/src/UpdateLMH.h (264 bytes security) (deflated 63%)
adding: Test/src/UpdateMultiplicativePositive.h (264 bytes security) (deflated 84%)
adding: Test/src/UpdatePhiMH.h (264 bytes security) (deflated 62%)
adding: Test/src/UpdateRC2MH.h (264 bytes security) (deflated 73%)
adding: Test/src/UpdateRhoGamma2MH.h (264 bytes security) (deflated 74%)
adding: Test/src/UpdateRhoMH.h (264 bytes security) (deflated 70%)
adding: Test/src/UpdateRMH.h (264 bytes security) (deflated 70%)
adding: Test/src/UpdateSigma2MH.h (264 bytes security) (deflated 64%)
adding: Test/src/UpdateTau2RDDeltaMH.h (264 bytes security) (deflated 76%)
adding: Test/src/UpdateTau2RhoMH.h (264 bytes security) (deflated 67%)
adding: Test/src/UpdateTau2RhoNuMH.h (264 bytes security) (deflated 75%)
adding: Test/src/UpdateTau2RMH.h (264 bytes security) (deflated 67%)
adding: Test/src/UpdateThetaMH.h (264 bytes security) (deflated 62%)
adding: Test/src/UpdateTMH.h (264 bytes security) (deflated 61%)
adding: Test/src/UpdateXiGibbs.h (264 bytes security) (deflated 71%)
adding: Test/src/Update_v2.cpp (264 bytes security) (deflated 89%)
adding: Test/src/Update_v2.h (264 bytes security) (deflated 89%)
adding: Test/src/Utility_v2.cpp (264 bytes security) (deflated 83%)
adding: Test/src/Utility_v2.h (264 bytes security) (deflated 82%)
adding: Test/vignettes/ (304 bytes security) (stored 0%)
adding: Test/vignettes/callC.R (264 bytes security) (deflated 55%)
adding: unitTests/ (304 bytes security) (stored 0%)
adding: unitTests/Makefile (264 bytes security) (deflated 23%)
adding: unitTests/report.html (264 bytes security) (deflated 61%)
adding: unitTests/report.txt (264 bytes security) (deflated 48%)
adding: unitTests/reportSummary.txt (264 bytes security) (deflated 43%)