BioC 3.5: BUILD BIN report for CNAnorm on veracruz2

Package: CNAnorm

Version: 1.22.1

Command: rm -rf CNAnorm.buildbin-libdir && mkdir CNAnorm.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CNAnorm_1.22.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CNAnorm.buildbin-libdir

StartedAt: 2017-10-18 10:42:56 -0400 (Wed, 18 Oct 2017)

EndedAt: 2017-10-18 10:43:11 -0400 (Wed, 18 Oct 2017)

EllapsedTime: 14.9 seconds

RetCode: 0

Status:  OK

PackageFile: CNAnorm_1.22.1.tgz

PackageFileSize: 806.1 KiB

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### Running command:
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###   rm -rf CNAnorm.buildbin-libdir && mkdir CNAnorm.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CNAnorm_1.22.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CNAnorm.buildbin-libdir
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=CNAnorm.buildbin-libdir CNAnorm_1.22.1.tar.gz'
>>>>>>> 

* installing *source* package ‘CNAnorm’ ...
** libs
gfortran   -fPIC  -g -O2  -c daxpy.f -o daxpy.o
gfortran   -fPIC  -g -O2  -c ddot.f -o ddot.o
gfortran   -fPIC  -g -O2  -c dgbfa.f -o dgbfa.o
gfortran   -fPIC  -g -O2  -c dgbsl.f -o dgbsl.o
gfortran   -fPIC  -g -O2  -c dscal.f -o dscal.o
gfortran   -fPIC  -g -O2  -c dsmooth.f -o dsmooth.o
gfortran   -fPIC  -g -O2  -c idamax.f -o idamax.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CNAnorm.so daxpy.o ddot.o dgbfa.o dgbsl.o dscal.o dsmooth.o idamax.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.5-bioc/meat/CNAnorm.buildbin-libdir/CNAnorm/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (CNAnorm)


>>>>>>> 
>>>>>>> FIXING LINKS FOR CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgcc_s.1.dylib" "CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so"
install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.5.2.dylib" "CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.dylib" "CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so"
install_name_tool -change "/usr/local/gfortran/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so"
install_name_tool -change "/usr/local/gfortran/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "CNAnorm.buildbin-libdir/CNAnorm/libs//CNAnorm.so"