AtlasRDF 1.12.0 Simon Jupp
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017) | URL: https://git.bioconductor.org/packages/AtlasRDF | Branch: RELEASE_3_5 | Last Commit: 098bfe6 | Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | ERROR | skipped | | |
tokay2 | Windows Server 2012 R2 Standard / x64 | NotNeeded | ERROR | skipped | skipped | |
veracruz2 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | [ ERROR ] | skipped | skipped | |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AtlasRDF
###
##############################################################################
##############################################################################
* checking for file ‘AtlasRDF/DESCRIPTION’ ... OK
* preparing ‘AtlasRDF’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: hash
hash-2.2.6 provided by Decision Patterns
Loading required package: SPARQL
Loading required package: XML
Loading required package: RCurl
Loading required package: bitops
An error occured when trying SPARQL query for includeOnlySubclasses function Error: XML content does not seem to be XML: ''
Error in retrieving subclasses of class efo:EFO_0000408
Error: processing vignette 'AtlasRDF_vignette.Rnw' failed with diagnostics:
chunk 13
Error : trying to get slot "p.value" from an object of a basic class ("NULL") with no slots
Execution halted