mgsa 1.24.0
Sebastian Bauer
| Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/mgsa | | Last Changed Rev: 129126 / Revision: 131943 | | Last Changed Date: 2017-04-24 15:25:24 -0400 (Mon, 24 Apr 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | [ OK ] | OK | WARNINGS | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | WARNINGS | OK | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD INSTALL mgsa
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* installing to library ‘/home/biocbuild/bbs-3.5-bioc/R/library’
* installing *source* package ‘mgsa’ ...
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -I/home/biocbuild/bbs-3.5-bioc/R/include -DNDEBUG -I/usr/local/include -I. -fopenmp -fpic -g -O2 -Wall -c mgsa-core.c -o mgsa-core.o
mgsa-core.c:796:13: warning: ‘print_context’ defined but not used [-Wunused-function]
static void print_context(struct context *cn)
^
gcc -I/home/biocbuild/bbs-3.5-bioc/R/include -DNDEBUG -I/usr/local/include -I. -fopenmp -fpic -g -O2 -Wall -c mgsa.c -o mgsa.o
mgsa.c: In function ‘create_parameter_prior_from_R’:
mgsa.c:52:10: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
if (!(p = R_alloc(1,sizeof(*p))))
^
mgsa.c:65:19: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
if (!(p->values = R_alloc(p->number_of_states,sizeof(p->values[0]))))
^
mgsa.c: In function ‘create_summary_for_param_from_R’:
mgsa.c:177:19: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
if (!(sum->dmap = R_alloc(number_of_discrete_values,sizeof(sum->dmap[0]))))
^
mgsa.c: In function ‘mgsa_mcmc’:
mgsa.c:407:7: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
nas = R_alloc(las,sizeof(nas[0]));
^
gcc -I/home/biocbuild/bbs-3.5-bioc/R/include -DNDEBUG -I/usr/local/include -I. -fopenmp -fpic -g -O2 -Wall -c mt.c -o mt.o
gcc -shared -L/home/biocbuild/bbs-3.5-bioc/R/lib -L/usr/local/lib -o mgsa.so mgsa-core.o mgsa.o mt.o -fopenmp -L/home/biocbuild/bbs-3.5-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.5-bioc/R/library/mgsa/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (mgsa)