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BioC 3.5: BUILD report for CopyNumber450k on tokay2

This page was generated on 2017-08-16 13:22:59 -0400 (Wed, 16 Aug 2017).

Package 277/1382HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CopyNumber450k 1.12.0
Simon Papillon-Cavanagh
Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/CopyNumber450k
Last Changed Rev: 129126 / Revision: 131943
Last Changed Date: 2017-04-24 15:25:24 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded [ ERROR ] skipped  skipped 
veracruz2 OS X 10.11.6 El Capitan / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: CopyNumber450k
Version: 1.12.0
Command: chmod a+r CopyNumber450k -R && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CopyNumber450k
StartedAt: 2017-08-15 20:04:46 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 20:04:52 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 6.2 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r CopyNumber450k -R && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CopyNumber450k
###
##############################################################################
##############################################################################


* checking for file 'CopyNumber450k/DESCRIPTION' ... OK
* preparing 'CopyNumber450k':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
Warning: running command '"C:/Users/biocbuild/bbs-3.5-bioc/R/bin/x64/Rcmd.exe" INSTALL -l "C:\Users\biocbuild\bbs-3.5-bioc\tmpdir\RtmpuKLe0j\Rinst9604c945bb2" --no-multiarch "C:/Users/biocbuild/bbs-3.5-bioc/tmpdir/RtmpuKLe0j/Rbuild960440b7f87/CopyNumber450k"' had status 1
      -----------------------------------
* installing *source* package 'CopyNumber450k' ...
** R
Error in .install_package_code_files(".", instdir) : 
files in 'C:/Users/biocbuild/bbs-3.5-bioc/tmpdir/RtmpuKLe0j/Rbuild960440b7f87/CopyNumber450k/R' missing from 'Collate' field:
  zzz.R
ERROR: unable to collate and parse R files for package 'CopyNumber450k'
* removing 'C:/Users/biocbuild/bbs-3.5-bioc/tmpdir/RtmpuKLe0j/Rinst9604c945bb2/CopyNumber450k'
      -----------------------------------
ERROR: package installation failed