EatonEtAlChIPseq 0.11.0
Patrick Aboyoun
| Snapshot Date: 2016-05-28 09:20:19 -0700 (Sat, 28 May 2016) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/EatonEtAlChIPseq | | Last Changed Rev: 3763 / Revision: 3781 | | Last Changed Date: 2016-05-03 14:48:02 -0700 (Tue, 03 May 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | NotNeeded | OK | [ OK ] | OK | |
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### Running command:
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### rm -rf EatonEtAlChIPseq.buildbin-libdir EatonEtAlChIPseq.Rcheck && mkdir EatonEtAlChIPseq.buildbin-libdir EatonEtAlChIPseq.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=EatonEtAlChIPseq.buildbin-libdir EatonEtAlChIPseq_0.11.0.tar.gz >EatonEtAlChIPseq.Rcheck\00install.out 2>&1 && cp EatonEtAlChIPseq.Rcheck\00install.out EatonEtAlChIPseq-install.out && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=EatonEtAlChIPseq.buildbin-libdir --install="check:EatonEtAlChIPseq-install.out" --force-multiarch --no-vignettes --timings EatonEtAlChIPseq_0.11.0.tar.gz
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* using log directory 'D:/biocbld/bbs-3.4-data-experiment/meat/EatonEtAlChIPseq.Rcheck'
* using R version 3.3.0 (2016-05-03)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'EatonEtAlChIPseq/DESCRIPTION' ... OK
* this is package 'EatonEtAlChIPseq' version '0.11.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'EatonEtAlChIPseq' can be installed ... OK
* checking installed package size ... NOTE
installed size is 20.6Mb
sub-directories of 1Mb or more:
extdata 20.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Non-standard license specification:
Artistic 2.0
Standardizable: TRUE
Standardized license specification:
Artistic-2.0
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
orcAligns 17.99 0.52 31.76
orcPeaks 0.11 0.00 6.82
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
orcAligns 17.13 0.44 17.58
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
'D:/biocbld/bbs-3.4-data-experiment/meat/EatonEtAlChIPseq.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'EatonEtAlChIPseq' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
install for x64
* installing *source* package 'EatonEtAlChIPseq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EatonEtAlChIPseq' as EatonEtAlChIPseq_0.11.0.zip
* DONE (EatonEtAlChIPseq)