mgsa 1.22.0
Sebastian Bauer
| Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/mgsa | | Last Changed Rev: 122710 / Revision: 128728 | | Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | |  |
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### rm -rf mgsa.buildbin-libdir && mkdir mgsa.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/mgsa_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=mgsa.buildbin-libdir --merge-multiarch mgsa_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL mgsa_1.22.0.zip && rm mgsa_1.22.0.tar.gz mgsa_1.22.0.zip
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install for i386
* installing *source* package 'mgsa' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c mgsa.c -o mgsa.o
mgsa.c: In function 'ts_R_alloc':
mgsa.c:57:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
mgsa.c: In function 'mgsa_mcmc':
mgsa.c:1492:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for
^
mgsa.c:1498:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o mgsa.dll tmp.def mgsa.o -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/mgsa.buildbin-libdir/mgsa/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'mgsa' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c mgsa.c -o mgsa.o
mgsa.c: In function 'ts_R_alloc':
mgsa.c:57:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
mgsa.c: In function 'mgsa_mcmc':
mgsa.c:1492:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for
^
mgsa.c:1498:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o mgsa.dll tmp.def mgsa.o -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/mgsa.buildbin-libdir/mgsa/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mgsa' as mgsa_1.22.0.zip
* DONE (mgsa)
* installing to library 'C:/Users/biocbuild/bbs-3.4-bioc/R/library'
package 'mgsa' successfully unpacked and MD5 sums checked