iClusterPlus 1.10.0
Qianxing Mo , Ronglai Shen
| Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/iClusterPlus | | Last Changed Rev: 122710 / Revision: 128728 | | Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |  |
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### rm -rf iClusterPlus.buildbin-libdir && mkdir iClusterPlus.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/iClusterPlus_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=iClusterPlus.buildbin-libdir --merge-multiarch iClusterPlus_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL iClusterPlus_1.10.0.zip && rm iClusterPlus_1.10.0.tar.gz iClusterPlus_1.10.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2 19.8M 2 600k 0 0 1165k 0 0:00:17 --:--:-- 0:00:17 1188k
100 19.8M 100 19.8M 0 0 14.1M 0 0:00:01 0:00:01 --:--:-- 14.2M
install for i386
* installing *source* package 'iClusterPlus' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
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** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c iClusterPlus.c -o iClusterPlus.o
iClusterPlus.c: In function 'iClusterCore':
iClusterPlus.c:1098:60: warning: unused variable 'tempm3' [-Wunused-variable]
double *btp,*btpb, *EXZt,*tempX,*tempm0,*tempm1,*tempm2,*tempm3,*BOld,*PhivecOld, *XtXdiag;
^
iClusterPlus.c:1096:18: warning: variable 'pp' set but not used [-Wunused-but-set-variable]
int i, j,kk,pk,pp,s,t;
^
C:/Rtools/mingw_32/bin/gfortran -fdefault-real-8 -ffixed-form -O3 -mtune=core2 -c newGLMnet.f90 -o newGLMnet.o
C:/Rtools/mingw_32/bin/gfortran -shared -s -static-libgcc -o iClusterPlus.dll tmp.def iClusterPlus.o newGLMnet.o -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/i386 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/iClusterPlus.buildbin-libdir/iClusterPlus/libs/i386
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'iClusterPlus.Rnw' using 'UTF-8'
** testing if installed package can be loaded
install for x64
* installing *source* package 'iClusterPlus' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c iClusterPlus.c -o iClusterPlus.o
iClusterPlus.c: In function 'iClusterCore':
iClusterPlus.c:1098:60: warning: unused variable 'tempm3' [-Wunused-variable]
double *btp,*btpb, *EXZt,*tempX,*tempm0,*tempm1,*tempm2,*tempm3,*BOld,*PhivecOld, *XtXdiag;
^
iClusterPlus.c:1096:18: warning: variable 'pp' set but not used [-Wunused-but-set-variable]
int i, j,kk,pk,pp,s,t;
^
C:/Rtools/mingw_64/bin/gfortran -fdefault-real-8 -ffixed-form -O2 -mtune=core2 -c newGLMnet.f90 -o newGLMnet.o
C:/Rtools/mingw_64/bin/gfortran -shared -s -static-libgcc -o iClusterPlus.dll tmp.def iClusterPlus.o newGLMnet.o -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/x64 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/iClusterPlus.buildbin-libdir/iClusterPlus/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iClusterPlus' as iClusterPlus_1.10.0.zip
* DONE (iClusterPlus)
* installing to library 'C:/Users/biocbuild/bbs-3.4-bioc/R/library'
package 'iClusterPlus' successfully unpacked and MD5 sums checked