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BioC 3.4: INSTALL report for AnnotationDbi on tokay1

This page was generated on 2017-04-15 16:15:06 -0400 (Sat, 15 Apr 2017).

Package 48/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationDbi 1.36.2
Bioconductor Package Maintainer
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/AnnotationDbi
Last Changed Rev: 126303 / Revision: 128728
Last Changed Date: 2017-01-29 12:12:21 -0500 (Sun, 29 Jan 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: AnnotationDbi
Version: 1.36.2
Command: rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/AnnotationDbi_1.36.2.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=AnnotationDbi.buildbin-libdir --merge-multiarch AnnotationDbi_1.36.2.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.36.2.zip && rm AnnotationDbi_1.36.2.tar.gz AnnotationDbi_1.36.2.zip
StartedAt: 2017-04-14 18:06:42 -0400 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 18:08:45 -0400 (Fri, 14 Apr 2017)
EllapsedTime: 122.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/AnnotationDbi_1.36.2.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=AnnotationDbi.buildbin-libdir --merge-multiarch AnnotationDbi_1.36.2.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.36.2.zip  && rm AnnotationDbi_1.36.2.tar.gz AnnotationDbi_1.36.2.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3858k  100 3858k    0     0  5272k      0 --:--:-- --:--:-- --:--:-- 5277k

install for i386

* installing *source* package 'AnnotationDbi' ...
** R
** inst
** preparing package for lazy loading
in method for 'initialize' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'toString' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'show' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'rev' with signature '"L2Rlink"': no definition for class "L2Rlink"
Creating a new generic function for 'packageName' in package 'AnnotationDbi'
Creating a generic function for 'ls' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'eapply' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'exists' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'sample' from package 'base' in package 'AnnotationDbi'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'AnnotationDbi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AnnotationDbi' as AnnotationDbi_1.36.2.zip
* DONE (AnnotationDbi)
* installing to library 'C:/Users/biocbuild/bbs-3.4-bioc/R/library'
package 'AnnotationDbi' successfully unpacked and MD5 sums checked