BioC 3.3: INSTALL report for simpleaffy on zin2

Package: simpleaffy

Version: 2.48.0

Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD INSTALL simpleaffy

StartedAt: 2016-10-12 18:09:46 -0700 (Wed, 12 Oct 2016)

EndedAt: 2016-10-12 18:09:57 -0700 (Wed, 12 Oct 2016)

EllapsedTime: 11.2 seconds

RetCode: 0

Status:  OK

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD INSTALL simpleaffy
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.3-bioc/R/library’
* installing *source* package ‘simpleaffy’ ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-3.3-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c simpleaffy.c -o simpleaffy.o
simpleaffy.c: In function ‘bgmas’:
simpleaffy.c:440:5: warning: passing argument 1 of ‘REprintf’ from incompatible pointer type [enabled by default]
     if(gn >= ngrid) REprintf(stderr,"Really ouch! %d %d\n",gn,ends[gn]);
     ^
In file included from /home/biocbuild/bbs-3.3-bioc/R/include/R.h:72:0,
                 from simpleaffy.c:5:
/home/biocbuild/bbs-3.3-bioc/R/include/R_ext/Print.h:40:6: note: expected ‘const char *’ but argument is of type ‘struct _IO_FILE *’
 void REprintf(const char *, ...);
      ^
gcc -std=gnu99 -shared -L/home/biocbuild/bbs-3.3-bioc/R/lib -L/usr/local/lib -o simpleaffy.so simpleaffy.o -L/home/biocbuild/bbs-3.3-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.3-bioc/R/library/simpleaffy/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (simpleaffy)