Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L [M] N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.3: INSTALL report for makecdfenv on zin2

This page was generated on 2016-10-13 12:40:34 -0700 (Thu, 13 Oct 2016).

Package 652/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
makecdfenv 1.48.0
James W. MacDonald
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/makecdfenv
Last Changed Rev: 117079 / Revision: 122332
Last Changed Date: 2016-05-03 14:20:18 -0700 (Tue, 03 May 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: makecdfenv
Version: 1.48.0
Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD INSTALL makecdfenv
StartedAt: 2016-10-12 18:09:34 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 18:09:37 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 3.6 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD INSTALL makecdfenv
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.3-bioc/R/library’
* installing *source* package ‘makecdfenv’ ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for main in -lz... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-3.3-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1  -I/usr/local/include    -fpic  -g -O2  -Wall -c read_cdffile.c -o read_cdffile.o
read_cdffile.c: In function ‘readQC’:
read_cdffile.c:576:7: warning: variable ‘typeQC’ set but not used [-Wunused-but-set-variable]
   int typeQC;
       ^
read_cdffile.c: In function ‘openCDFfile’:
read_cdffile.c:340:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
       fgets(buffy, SIZE_LINE, affyFile->stream);
            ^
gcc -std=gnu99 -shared -L/home/biocbuild/bbs-3.3-bioc/R/lib -L/usr/local/lib -o makecdfenv.so read_cdffile.o -lz -L/home/biocbuild/bbs-3.3-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.3-bioc/R/library/makecdfenv/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (makecdfenv)