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BioC 3.3: INSTALL report for fabia on moscato2

This page was generated on 2016-10-13 12:49:26 -0700 (Thu, 13 Oct 2016).

Package 371/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fabia 2.18.1
Sepp Hochreiter
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/fabia
Last Changed Rev: 121610 / Revision: 122332
Last Changed Date: 2016-10-01 00:35:35 -0700 (Sat, 01 Oct 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: fabia
Version: 2.18.1
Command: rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.3/bioc/src/contrib/fabia_2.18.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --library=fabia.buildbin-libdir --merge-multiarch fabia_2.18.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL fabia_2.18.1.zip && rm fabia_2.18.1.tar.gz fabia_2.18.1.zip
StartedAt: 2016-10-12 18:34:53 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 18:35:48 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 54.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.3/bioc/src/contrib/fabia_2.18.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --library=fabia.buildbin-libdir --merge-multiarch fabia_2.18.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL fabia_2.18.1.zip  && rm fabia_2.18.1.tar.gz fabia_2.18.1.zip
###
##############################################################################
##############################################################################




install for i386

* installing *source* package 'fabia' ...
** libs
  running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
C:/Rtools/mingw_32/bin/gcc  -c fabiac.c -o fabia.o -I"E:/biocbld/BBS-3˜1.3-B/R/include" -Wall -O3
C:/Rtools/mingw_32/bin/gcc  -shared -s -static-libgcc fabia.o -L"E:/biocbld/BBS-3˜1.3-B/R/bin/i386"  -lR  -o fabia.dll 
rm -f fabia.o *.a *.o *.so
installing to E:/biocbld/bbs-3.3-bioc/meat/fabia.buildbin-libdir/fabia/libs/i386
** R
** demo
** inst
** preparing package for lazy loading
Creating a generic function for 'summary' from package 'base' in package 'fabia'
Creating a generic function for 'plot' from package 'graphics' in package 'fabia'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'fabia' ...
** libs
  running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
C:/Rtools/mingw_64/bin/gcc  -c fabiac.c -o fabia.o -I"E:/biocbld/BBS-3˜1.3-B/R/include" -Wall -O3
C:/Rtools/mingw_64/bin/gcc  -shared -s -static-libgcc fabia.o -L"E:/biocbld/BBS-3˜1.3-B/R/bin/x64"  -lR  -o fabia.dll 
rm -f fabia.o *.a *.o *.so
installing to E:/biocbld/bbs-3.3-bioc/meat/fabia.buildbin-libdir/fabia/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fabia' as fabia_2.18.1.zip
* DONE (fabia)
* installing to library 'E:/biocbld/bbs-3.3-bioc/R/library'
package 'fabia' successfully unpacked and MD5 sums checked