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BioC 3.3: BUILD BIN report for fCI on morelia

This page was generated on 2016-04-21 13:26:48 -0700 (Thu, 21 Apr 2016).

Package 379/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fCI 1.1.2
Shaojun Tang
Snapshot Date: 2016-04-20 17:20:35 -0700 (Wed, 20 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/fCI
Last Changed Rev: 113733 / Revision: 116626
Last Changed Date: 2016-02-17 18:44:36 -0800 (Wed, 17 Feb 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: fCI
Version: 1.1.2
Command: rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh fCI_1.1.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R fCI.buildbin-libdir
StartedAt: 2016-04-21 08:54:28 -0700 (Thu, 21 Apr 2016)
EndedAt: 2016-04-21 08:54:31 -0700 (Thu, 21 Apr 2016)
EllapsedTime: 2.9 seconds
RetCode: 0
Status:  OK 
PackageFile: fCI_1.1.2.tgz
PackageFileSize: 1021 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh fCI_1.1.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R fCI.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=fCI.buildbin-libdir fCI_1.1.2.tar.gz'
>>>>>>> 

* installing *source* package ‘fCI’ ...
** R
** data
** inst
** preparing package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
in method for ‘initialize’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘normalization’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘setfCI’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘populate’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘find.fci.targets’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘show.targets’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘call.npci’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘compute’ with signature ‘"NPCI"’: no definition for class “NPCI”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
* DONE (fCI)