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BioC 3.3: BUILD report for coMET on oaxaca

This page was generated on 2016-10-13 13:01:13 -0700 (Thu, 13 Oct 2016).

Package 229/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
coMET 1.4.4
Tiphaine Martin
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/coMET
Last Changed Rev: 118502 / Revision: 122332
Last Changed Date: 2016-06-12 09:31:06 -0700 (Sun, 12 Jun 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  ERROR  skipped 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: coMET
Version: 1.4.4
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data coMET
StartedAt: 2016-10-12 21:43:45 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 21:46:41 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 176.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data coMET
###
##############################################################################
##############################################################################


* checking for file ‘coMET/DESCRIPTION’ ... OK
* preparing ‘coMET’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Quitting from lines 325-333 (coMET.Rnw) 
Error: processing vignette 'coMET.Rnw' failed with diagnostics:
unknown table name 'chromInfo'
Execution halted