BioC 3.3: CHECK report for ExperimentHub on oaxaca

Package: ExperimentHub

Version: 0.99.9

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings ExperimentHub_0.99.9.tar.gz

StartedAt: 2016-05-02 01:16:33 -0700 (Mon, 02 May 2016)

EndedAt: 2016-05-02 01:18:05 -0700 (Mon, 02 May 2016)

EllapsedTime: 91.2 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: ExperimentHub.Rcheck

Warnings: 1

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings ExperimentHub_0.99.9.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.3-bioc/meat/ExperimentHub.Rcheck’
* using R version 3.3.0 RC (2016-04-26 r70550)
* using platform: x86_64-apple-darwin13.4.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ExperimentHub/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ExperimentHub’ version ‘0.99.9’
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘ExperimentHubData’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘ExperimentHub’ can be installed ... [7s/8s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... WARNING
Subdirectory ‘inst’ contains no files.
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [4s/4s] OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.3-bioc/meat/ExperimentHub.Rcheck/00check.log’
for details.

* installing *source* package ‘ExperimentHub’ ...
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ExperimentHub)

name	user	system	elapsed
ExperimentHub-class	0.001	0.000	0.000
getExperimentHubOption	0.001	0.000	0.001