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BioC 3.3: INSTALL report for BiocStyle on moscato2

This page was generated on 2016-10-13 12:51:37 -0700 (Thu, 13 Oct 2016).

Package 107/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocStyle 2.0.3
Bioconductor Package Maintainer
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/BiocStyle
Last Changed Rev: 119866 / Revision: 122332
Last Changed Date: 2016-08-03 05:15:46 -0700 (Wed, 03 Aug 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BiocStyle
Version: 2.0.3
Command: rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.3/bioc/src/contrib/BiocStyle_2.0.3.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_2.0.3.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL BiocStyle_2.0.3.zip && rm BiocStyle_2.0.3.tar.gz BiocStyle_2.0.3.zip
StartedAt: 2016-10-12 18:29:55 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 18:30:41 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 45.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.3/bioc/src/contrib/BiocStyle_2.0.3.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_2.0.3.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL BiocStyle_2.0.3.zip  && rm BiocStyle_2.0.3.tar.gz BiocStyle_2.0.3.zip
###
##############################################################################
##############################################################################




install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiocStyle' as BiocStyle_2.0.3.zip
* DONE (BiocStyle)
* installing to library 'E:/biocbld/bbs-3.3-bioc/R/library'
package 'BiocStyle' successfully unpacked and MD5 sums checked