BadRegionFinder 1.0.0
Sarah Sandmann
| Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/BadRegionFinder | | Last Changed Rev: 117079 / Revision: 122332 | | Last Changed Date: 2016-05-03 14:20:18 -0700 (Tue, 03 May 2016) |
| zin2 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | [ OK ] | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd BadRegionFinder.buildbin-libdir/BadRegionFinder && zip -r ../../BadRegionFinder_1.0.0.zip . & cd ../..
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adding: DESCRIPTION (188 bytes security) (deflated 43%)
adding: doc/ (256 bytes security) (stored 0%)
adding: doc/BadRegionFinder.pdf (188 bytes security) (deflated 10%)
adding: doc/BadRegionFinder.R (188 bytes security) (deflated 81%)
adding: doc/BadRegionFinder.Rnw (188 bytes security) (deflated 76%)
adding: doc/index.html (188 bytes security) (deflated 60%)
adding: extdata/ (256 bytes security) (stored 0%)
adding: extdata/BadCoverageChr2;20;0.9;100;0.9.txt (188 bytes security) (deflated 93%)
adding: extdata/BadCoverageGenes20;0.8;100;0.9.txt (188 bytes security) (deflated 49%)
adding: extdata/BadCoverageSummary20;0.8;100;0.9.txt (188 bytes security) (deflated 8%)
adding: extdata/CoverageQuality_Details.png (188 bytes security) (deflated 54%)
adding: extdata/CoverageQuality_Summary_Genes.png (188 bytes security) (deflated 46%)
adding: extdata/regionsOfInterest.bed (188 bytes security) (deflated 41%)
adding: extdata/SampleNames.txt (188 bytes security) (deflated 6%)
adding: extdata/SampleNames2.txt (188 bytes security) (deflated 10%)
adding: extdata/Summary_chr1.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr10.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr11.txt (188 bytes security) (deflated 12%)
adding: extdata/Summary_chr12.txt (188 bytes security) (deflated 9%)
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adding: extdata/Summary_chr17.txt (188 bytes security) (deflated 11%)
adding: extdata/Summary_chr18.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr19.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr2.txt (188 bytes security) (deflated 80%)
adding: extdata/Summary_chr20.txt (188 bytes security) (deflated 12%)
adding: extdata/Summary_chr21.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr22.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr3.txt (188 bytes security) (deflated 11%)
adding: extdata/Summary_chr4.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr5.txt (188 bytes security) (deflated 11%)
adding: extdata/Summary_chr6.txt (188 bytes security) (deflated 9%)
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adding: extdata/Summary_chr8.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chr9.txt (188 bytes security) (deflated 9%)
adding: extdata/Summary_chrMT.txt (188 bytes security) (deflated 10%)
adding: extdata/Summary_chrX.txt (188 bytes security) (deflated 11%)
adding: extdata/Summary_chrY.txt (188 bytes security) (deflated 9%)
adding: extdata/targetRegions.bed (188 bytes security) (deflated 10%)
adding: extdata/targetRegions2.bed (188 bytes security) (deflated 34%)
adding: extdata/Test2_454.bai (188 bytes security) (deflated 100%)
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adding: extdata/Test2_ion.bam (188 bytes security) (deflated 0%)
adding: extdata/Test_454.bai (188 bytes security) (deflated 99%)
adding: extdata/Test_454.bam (188 bytes security) (deflated 0%)
adding: extdata/Test_ion.bai (188 bytes security) (deflated 99%)
adding: extdata/Test_ion.bam (188 bytes security) (stored 0%)
adding: help/ (256 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 77%)
adding: help/BadRegionFinder.rdb (188 bytes security) (deflated 2%)
adding: help/BadRegionFinder.rdx (188 bytes security) (stored 0%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: html/ (256 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 79%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 68%)
adding: MD5 (188 bytes security) (deflated 48%)
adding: Meta/ (256 bytes security) (stored 0%)
adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
adding: Meta/links.rds (188 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
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adding: NAMESPACE (188 bytes security) (deflated 60%)
adding: NEWS (188 bytes security) (stored 0%)
adding: R/ (256 bytes security) (stored 0%)
adding: R/BadRegionFinder (188 bytes security) (deflated 41%)
adding: R/BadRegionFinder.rdb (188 bytes security) (deflated 1%)
adding: R/BadRegionFinder.rdx (188 bytes security) (stored 0%)