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BioC 3.3: BUILD report for lumi on windows2.bioconductor.org

This page was generated on 2015-10-27 12:14:11 -0400 (Tue, 27 Oct 2015).

Package 577/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lumi 2.23.0
Pan Du
Snapshot Date: 2015-10-26 20:20:04 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/lumi
Last Changed Rev: 109592 / Revision: 109948
Last Changed Date: 2015-10-13 15:59:53 -0400 (Tue, 13 Oct 2015)
linux2.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
windows2.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: lumi
Version: 2.23.0
Command: chmod a+r lumi -R && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data lumi
StartedAt: 2015-10-26 21:29:13 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 21:31:00 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 107.3 seconds
RetCode: 0
Status:  OK  
PackageFile: lumi_2.23.0.tar.gz
PackageFileSize: 8.899 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r lumi -R && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data lumi
###
##############################################################################
##############################################################################


* checking for file 'lumi/DESCRIPTION' ... OK
* preparing 'lumi':
* checking DESCRIPTION meta-information ... OK
Warning: bad markup (extra space?) at lumiMethyR.Rd:18:16
Warning: bad markup (extra space?) at lumiMethyR.Rd:19:28
Warning: bad markup (extra space?) at lumiMethyR.Rd:20:13
* installing the package to build vignettes
* creating vignettes ... OK
* excluding invalid files
Subdirectory 'R' contains invalid file names:
  'affyExpresso.R.deprecated' 'affyVstRma.R.deprecated'
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
* building 'lumi_2.23.0.tar.gz'