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### Running command:
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### C:\cygwin64\bin\curl.exe -O http://linux2.bioconductor.org/BBS/3.3/bioc/src/contrib/flowWorkspace_3.17.1.tar.gz && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch flowWorkspace_3.17.1.tar.gz && rm flowWorkspace_3.17.1.tar.gz
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 3639k 100 3639k 0 0 136M 0 --:--:-- --:--:-- --:--:-- 177M
install for i386
* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'flowWorkspace' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c GatingHierarchy.cpp -o GatingHierarchy.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c GatingSet.cpp -o GatingSet.o
In file included from include/flowData.hpp:34:0,
from include/gate.hpp:14,
from include/POPINDICES.hpp:15,
from include/nodeProperties.hpp:11,
from include/populationTree.hpp:11,
from include/GatingHierarchy.hpp:13,
from include/GatingSet.hpp:12,
from GatingSet.cpp:9:
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp: In function 'void boost::serialization::load(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::binary_iarchive, Allocator = std::allocator<bool>]':
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:58:9: instantiated from 'static void boost::serialization::free_loader<Archive, T>::invoke(Archive&, T&, unsigned int) [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:74:5: instantiated from 'void boost::serialization::split_free(Archive&, T&, unsigned int) [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:231:5: instantiated from 'void boost::serialization::serialize(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::binary_iarchive, Allocator = std::allocator<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/serialization.hpp:128:9: instantiated from 'void boost::serialization::serialize_adl(Archive&, T&, unsigned int) [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/archive/detail/iserializer.hpp:184:5: instantiated from 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
GatingSet.cpp:780:1: instantiated from here
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:216:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp: In function 'void boost::serialization::load(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::text_iarchive, Allocator = std::allocator<bool>]':
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:58:9: instantiated from 'static void boost::serialization::free_loader<Archive, T>::invoke(Archive&, T&, unsigned int) [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:74:5: instantiated from 'void boost::serialization::split_free(Archive&, T&, unsigned int) [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:231:5: instantiated from 'void boost::serialization::serialize(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::text_iarchive, Allocator = std::allocator<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/serialization.hpp:128:9: instantiated from 'void boost::serialization::serialize_adl(Archive&, T&, unsigned int) [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/archive/detail/iserializer.hpp:184:5: instantiated from 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
GatingSet.cpp:780:1: instantiated from here
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:216:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp: In function 'void boost::serialization::load(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::xml_iarchive, Allocator = std::allocator<bool>]':
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:58:9: instantiated from 'static void boost::serialization::free_loader<Archive, T>::invoke(Archive&, T&, unsigned int) [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:74:5: instantiated from 'void boost::serialization::split_free(Archive&, T&, unsigned int) [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:231:5: instantiated from 'void boost::serialization::serialize(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::xml_iarchive, Allocator = std::allocator<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/serialization.hpp:128:9: instantiated from 'void boost::serialization::serialize_adl(Archive&, T&, unsigned int) [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/archive/detail/iserializer.hpp:184:5: instantiated from 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
GatingSet.cpp:780:1: instantiated from here
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:216:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c GatingSet.pb.cc -o GatingSet.pb.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c POPINDICES.cpp -o POPINDICES.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_API.cpp -o R_API.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_GatingHierarchy.cpp -o R_GatingHierarchy.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_GatingSet.cpp -o R_GatingSet.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c calibrationTable.cpp -o calibrationTable.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c delimitedMessage.cpp -o delimitedMessage.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c flowData.cpp -o flowData.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c flowJoWorkspace.cpp -o flowJoWorkspace.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gate.cpp -o gate.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c global.cpp -o global.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c macFlowJoWorkspace.cpp -o macFlowJoWorkspace.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c nodeProperties.cpp -o nodeProperties.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c spline.cpp -o spline.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c transformation.cpp -o transformation.o
include/transformation.hpp: In constructor 'fasinhTrans::fasinhTrans()':
include/transformation.hpp:245:9: warning: 'fasinhTrans::length' will be initialized after [-Wreorder]
include/transformation.hpp:244:9: warning: 'double fasinhTrans::maxRange' [-Wreorder]
transformation.cpp:269:1: warning: when initialized here [-Wreorder]
include/transformation.hpp: In constructor 'fasinhTrans::fasinhTrans(double, double, double, double, double)':
include/transformation.hpp:245:9: warning: 'fasinhTrans::length' will be initialized after [-Wreorder]
include/transformation.hpp:244:9: warning: 'double fasinhTrans::maxRange' [-Wreorder]
transformation.cpp:273:1: warning: when initialized here [-Wreorder]
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c winFlowJoWorkspace.cpp -o winFlowJoWorkspace.o
winFlowJoWorkspace.cpp:494:27: warning: "/*" within comment [-Wcomment]
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c workspace.cpp -o workspace.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c wsNode.cpp -o wsNode.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/archive_exception.cpp -o boost_serialization/archive_exception.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_archive.cpp -o boost_serialization/basic_archive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_iarchive.cpp -o boost_serialization/basic_iarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_iserializer.cpp -o boost_serialization/basic_iserializer.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_oarchive.cpp -o boost_serialization/basic_oarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_oserializer.cpp -o boost_serialization/basic_oserializer.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_pointer_iserializer.cpp -o boost_serialization/basic_pointer_iserializer.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_pointer_oserializer.cpp -o boost_serialization/basic_pointer_oserializer.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_serializer_map.cpp -o boost_serialization/basic_serializer_map.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_iprimitive.cpp -o boost_serialization/basic_text_iprimitive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_oprimitive.cpp -o boost_serialization/basic_text_oprimitive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_wiprimitive.cpp -o boost_serialization/basic_text_wiprimitive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_woprimitive.cpp -o boost_serialization/basic_text_woprimitive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_xml_archive.cpp -o boost_serialization/basic_xml_archive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_iarchive.cpp -o boost_serialization/binary_iarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_oarchive.cpp -o boost_serialization/binary_oarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_wiarchive.cpp -o boost_serialization/binary_wiarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_woarchive.cpp -o boost_serialization/binary_woarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/codecvt_null.cpp -o boost_serialization/codecvt_null.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/extended_type_info.cpp -o boost_serialization/extended_type_info.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/extended_type_info_no_rtti.cpp -o boost_serialization/extended_type_info_no_rtti.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/extended_type_info_typeid.cpp -o boost_serialization/extended_type_info_typeid.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/polymorphic_iarchive.cpp -o boost_serialization/polymorphic_iarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/polymorphic_oarchive.cpp -o boost_serialization/polymorphic_oarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/stl_port.cpp -o boost_serialization/stl_port.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_iarchive.cpp -o boost_serialization/text_iarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_oarchive.cpp -o boost_serialization/text_oarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_wiarchive.cpp -o boost_serialization/text_wiarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_woarchive.cpp -o boost_serialization/text_woarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/utf8_codecvt_facet.cpp -o boost_serialization/utf8_codecvt_facet.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/void_cast.cpp -o boost_serialization/void_cast.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_archive_exception.cpp -o boost_serialization/xml_archive_exception.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_grammar.cpp -o boost_serialization/xml_grammar.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_iarchive.cpp -o boost_serialization/xml_iarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_oarchive.cpp -o boost_serialization/xml_oarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_wgrammar.cpp -o boost_serialization/xml_wgrammar.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_wiarchive.cpp -o boost_serialization/xml_wiarchive.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//i386/include/libxml2 -Iboost_serialization -Ic:/protobuf//i386/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_woarchive.cpp -o boost_serialization/xml_woarchive.o
g++ -m32 -shared -s -static-libgcc -o flowWorkspace.dll tmp.def GatingHierarchy.o GatingSet.o GatingSet.pb.o POPINDICES.o R_API.o R_GatingHierarchy.o R_GatingSet.o RcppExports.o calibrationTable.o delimitedMessage.o flowData.o flowJoWorkspace.o gate.o global.o macFlowJoWorkspace.o nodeProperties.o spline.o transformation.o winFlowJoWorkspace.o workspace.o wsNode.o boost_serialization/archive_exception.o boost_serialization/basic_archive.o boost_serialization/basic_iarchive.o boost_serialization/basic_iserializer.o boost_serialization/basic_oarchive.o boost_serialization/basic_oserializer.o boost_serialization/basic_pointer_iserializer.o boost_serialization/basic_pointer_oserializer.o boost_serialization/basic_serializer_map.o boost_serialization/basic_text_iprimitive.o boost_serialization/basic_text_oprimitive.o boost_serialization/basic_text_wiprimitive.o boost_serialization/basic_text_woprimitive.o boost_serialization/basic_xml_archive.o boost_serialization/binary_iarchive.o boost_serialization/binary_oarchive.o boost_serialization/binary_wiarchive.o boost_serialization/binary_woarchive.o boost_serialization/codecvt_null.o boost_serialization/extended_type_info.o boost_serialization/extended_type_info_no_rtti.o boost_serialization/extended_type_info_typeid.o boost_serialization/polymorphic_iarchive.o boost_serialization/polymorphic_oarchive.o boost_serialization/stl_port.o boost_serialization/text_iarchive.o boost_serialization/text_oarchive.o boost_serialization/text_wiarchive.o boost_serialization/text_woarchive.o boost_serialization/utf8_codecvt_facet.o boost_serialization/void_cast.o boost_serialization/xml_archive_exception.o boost_serialization/xml_grammar.o boost_serialization/xml_iarchive.o boost_serialization/xml_oarchive.o boost_serialization/xml_wgrammar.o boost_serialization/xml_wiarchive.o boost_serialization/xml_woarchive.o c:/libxml2//i386/lib/libxml2.a c:/protobuf//i386/lib/libprotobuf.a C:/biocbld/bbs-3.3-bioc/R/library/flowCore/lib/i386/libboost_regex.a -lws2_32 -Ld:/RCompile/r-compiling/local/local320/lib/i386 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/i386 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/flowWorkspace/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'flowWorkspace' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c GatingHierarchy.cpp -o GatingHierarchy.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c GatingSet.cpp -o GatingSet.o
In file included from include/flowData.hpp:34:0,
from include/gate.hpp:14,
from include/POPINDICES.hpp:15,
from include/nodeProperties.hpp:11,
from include/populationTree.hpp:11,
from include/GatingHierarchy.hpp:13,
from include/GatingSet.hpp:12,
from GatingSet.cpp:9:
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp: In function 'void boost::serialization::load(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::binary_iarchive, Allocator = std::allocator<bool>]':
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:58:9: instantiated from 'static void boost::serialization::free_loader<Archive, T>::invoke(Archive&, T&, unsigned int) [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:74:5: instantiated from 'void boost::serialization::split_free(Archive&, T&, unsigned int) [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:231:5: instantiated from 'void boost::serialization::serialize(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::binary_iarchive, Allocator = std::allocator<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/serialization.hpp:128:9: instantiated from 'void boost::serialization::serialize_adl(Archive&, T&, unsigned int) [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/archive/detail/iserializer.hpp:184:5: instantiated from 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::binary_iarchive, T = std::vector<bool>]'
GatingSet.cpp:780:1: instantiated from here
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:216:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp: In function 'void boost::serialization::load(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::text_iarchive, Allocator = std::allocator<bool>]':
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:58:9: instantiated from 'static void boost::serialization::free_loader<Archive, T>::invoke(Archive&, T&, unsigned int) [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:74:5: instantiated from 'void boost::serialization::split_free(Archive&, T&, unsigned int) [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:231:5: instantiated from 'void boost::serialization::serialize(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::text_iarchive, Allocator = std::allocator<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/serialization.hpp:128:9: instantiated from 'void boost::serialization::serialize_adl(Archive&, T&, unsigned int) [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/archive/detail/iserializer.hpp:184:5: instantiated from 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::text_iarchive, T = std::vector<bool>]'
GatingSet.cpp:780:1: instantiated from here
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:216:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp: In function 'void boost::serialization::load(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::xml_iarchive, Allocator = std::allocator<bool>]':
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:58:9: instantiated from 'static void boost::serialization::free_loader<Archive, T>::invoke(Archive&, T&, unsigned int) [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/split_free.hpp:74:5: instantiated from 'void boost::serialization::split_free(Archive&, T&, unsigned int) [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:231:5: instantiated from 'void boost::serialization::serialize(Archive&, std::vector<bool, Allocator>&, unsigned int) [with Archive = boost::archive::xml_iarchive, Allocator = std::allocator<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/serialization.hpp:128:9: instantiated from 'void boost::serialization::serialize_adl(Archive&, T&, unsigned int) [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/archive/detail/iserializer.hpp:184:5: instantiated from 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::xml_iarchive, T = std::vector<bool>]'
GatingSet.cpp:780:1: instantiated from here
c:/biocbld/bbs-3.3-bioc/R/library/BH/include/boost/serialization/vector.hpp:216:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c GatingSet.pb.cc -o GatingSet.pb.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c POPINDICES.cpp -o POPINDICES.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_API.cpp -o R_API.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_GatingHierarchy.cpp -o R_GatingHierarchy.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_GatingSet.cpp -o R_GatingSet.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c calibrationTable.cpp -o calibrationTable.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c delimitedMessage.cpp -o delimitedMessage.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c flowData.cpp -o flowData.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c flowJoWorkspace.cpp -o flowJoWorkspace.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gate.cpp -o gate.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c global.cpp -o global.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c macFlowJoWorkspace.cpp -o macFlowJoWorkspace.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c nodeProperties.cpp -o nodeProperties.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c spline.cpp -o spline.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c transformation.cpp -o transformation.o
include/transformation.hpp: In constructor 'fasinhTrans::fasinhTrans()':
include/transformation.hpp:245:9: warning: 'fasinhTrans::length' will be initialized after [-Wreorder]
include/transformation.hpp:244:9: warning: 'double fasinhTrans::maxRange' [-Wreorder]
transformation.cpp:269:1: warning: when initialized here [-Wreorder]
include/transformation.hpp: In constructor 'fasinhTrans::fasinhTrans(double, double, double, double, double)':
include/transformation.hpp:245:9: warning: 'fasinhTrans::length' will be initialized after [-Wreorder]
include/transformation.hpp:244:9: warning: 'double fasinhTrans::maxRange' [-Wreorder]
transformation.cpp:273:1: warning: when initialized here [-Wreorder]
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c winFlowJoWorkspace.cpp -o winFlowJoWorkspace.o
winFlowJoWorkspace.cpp:494:27: warning: "/*" within comment [-Wcomment]
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c workspace.cpp -o workspace.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c wsNode.cpp -o wsNode.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/archive_exception.cpp -o boost_serialization/archive_exception.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_archive.cpp -o boost_serialization/basic_archive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_iarchive.cpp -o boost_serialization/basic_iarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_iserializer.cpp -o boost_serialization/basic_iserializer.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_oarchive.cpp -o boost_serialization/basic_oarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_oserializer.cpp -o boost_serialization/basic_oserializer.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_pointer_iserializer.cpp -o boost_serialization/basic_pointer_iserializer.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_pointer_oserializer.cpp -o boost_serialization/basic_pointer_oserializer.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_serializer_map.cpp -o boost_serialization/basic_serializer_map.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_iprimitive.cpp -o boost_serialization/basic_text_iprimitive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_oprimitive.cpp -o boost_serialization/basic_text_oprimitive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_wiprimitive.cpp -o boost_serialization/basic_text_wiprimitive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_text_woprimitive.cpp -o boost_serialization/basic_text_woprimitive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/basic_xml_archive.cpp -o boost_serialization/basic_xml_archive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_iarchive.cpp -o boost_serialization/binary_iarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_oarchive.cpp -o boost_serialization/binary_oarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_wiarchive.cpp -o boost_serialization/binary_wiarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/binary_woarchive.cpp -o boost_serialization/binary_woarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/codecvt_null.cpp -o boost_serialization/codecvt_null.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/extended_type_info.cpp -o boost_serialization/extended_type_info.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/extended_type_info_no_rtti.cpp -o boost_serialization/extended_type_info_no_rtti.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/extended_type_info_typeid.cpp -o boost_serialization/extended_type_info_typeid.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/polymorphic_iarchive.cpp -o boost_serialization/polymorphic_iarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/polymorphic_oarchive.cpp -o boost_serialization/polymorphic_oarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/stl_port.cpp -o boost_serialization/stl_port.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_iarchive.cpp -o boost_serialization/text_iarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_oarchive.cpp -o boost_serialization/text_oarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_wiarchive.cpp -o boost_serialization/text_wiarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/text_woarchive.cpp -o boost_serialization/text_woarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/utf8_codecvt_facet.cpp -o boost_serialization/utf8_codecvt_facet.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/void_cast.cpp -o boost_serialization/void_cast.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_archive_exception.cpp -o boost_serialization/xml_archive_exception.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_grammar.cpp -o boost_serialization/xml_grammar.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_iarchive.cpp -o boost_serialization/xml_iarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_oarchive.cpp -o boost_serialization/xml_oarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_wgrammar.cpp -o boost_serialization/xml_wgrammar.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_wiarchive.cpp -o boost_serialization/xml_wiarchive.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DROUT -Ic:/libxml2//x64/include/libxml2 -Iboost_serialization -Ic:/protobuf//x64/include -DLIBXML_STATIC -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"c:/biocbld/bbs-3.3-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c boost_serialization/xml_woarchive.cpp -o boost_serialization/xml_woarchive.o
g++ -m64 -shared -s -static-libgcc -o flowWorkspace.dll tmp.def GatingHierarchy.o GatingSet.o GatingSet.pb.o POPINDICES.o R_API.o R_GatingHierarchy.o R_GatingSet.o RcppExports.o calibrationTable.o delimitedMessage.o flowData.o flowJoWorkspace.o gate.o global.o macFlowJoWorkspace.o nodeProperties.o spline.o transformation.o winFlowJoWorkspace.o workspace.o wsNode.o boost_serialization/archive_exception.o boost_serialization/basic_archive.o boost_serialization/basic_iarchive.o boost_serialization/basic_iserializer.o boost_serialization/basic_oarchive.o boost_serialization/basic_oserializer.o boost_serialization/basic_pointer_iserializer.o boost_serialization/basic_pointer_oserializer.o boost_serialization/basic_serializer_map.o boost_serialization/basic_text_iprimitive.o boost_serialization/basic_text_oprimitive.o boost_serialization/basic_text_wiprimitive.o boost_serialization/basic_text_woprimitive.o boost_serialization/basic_xml_archive.o boost_serialization/binary_iarchive.o boost_serialization/binary_oarchive.o boost_serialization/binary_wiarchive.o boost_serialization/binary_woarchive.o boost_serialization/codecvt_null.o boost_serialization/extended_type_info.o boost_serialization/extended_type_info_no_rtti.o boost_serialization/extended_type_info_typeid.o boost_serialization/polymorphic_iarchive.o boost_serialization/polymorphic_oarchive.o boost_serialization/stl_port.o boost_serialization/text_iarchive.o boost_serialization/text_oarchive.o boost_serialization/text_wiarchive.o boost_serialization/text_woarchive.o boost_serialization/utf8_codecvt_facet.o boost_serialization/void_cast.o boost_serialization/xml_archive_exception.o boost_serialization/xml_grammar.o boost_serialization/xml_iarchive.o boost_serialization/xml_oarchive.o boost_serialization/xml_wgrammar.o boost_serialization/xml_wiarchive.o boost_serialization/xml_woarchive.o c:/libxml2//x64/lib/libxml2.a c:/protobuf//x64/lib/libprotobuf.a C:/biocbld/bbs-3.3-bioc/R/library/flowCore/lib/x64/libboost_regex.a -lws2_32 -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/x64 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/flowWorkspace/libs/x64
** testing if installed package can be loaded
* DONE (flowWorkspace)
