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BioC 3.3: BUILD BIN report for ChAMP on morelia

This page was generated on 2015-10-22 17:53:57 -0400 (Thu, 22 Oct 2015).

Package 158/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChAMP 1.9.0
Tiffany Morris
Snapshot Date: 2015-10-21 20:20:05 -0400 (Wed, 21 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ChAMP
Last Changed Rev: 109592 / Revision: 109826
Last Changed Date: 2015-10-13 15:59:53 -0400 (Tue, 13 Oct 2015)
linux2.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
windows2.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: ChAMP
Version: 1.9.0
Command: rm -rf ChAMP.buildbin-libdir && mkdir ChAMP.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ChAMP_1.9.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ChAMP.buildbin-libdir
StartedAt: 2015-10-22 13:06:51 -0400 (Thu, 22 Oct 2015)
EndedAt: 2015-10-22 13:07:56 -0400 (Thu, 22 Oct 2015)
EllapsedTime: 64.5 seconds
RetCode: 0
Status:  OK 
PackageFile: ChAMP_1.9.0.tgz
PackageFileSize: 3.32 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf ChAMP.buildbin-libdir && mkdir ChAMP.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ChAMP_1.9.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ChAMP.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ChAMP.buildbin-libdir ChAMP_1.9.0.tar.gz'
>>>>>>> 

* installing *source* package ‘ChAMP’ ...
** R
** inst
** preparing package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : Error in 'rgl_init'
Warning: replacing previous import by ‘RPMM::ebayes’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::desc’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::colnames’ when loading ‘ChAMP’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : Error in 'rgl_init'
Warning: replacing previous import by ‘RPMM::ebayes’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::desc’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::colnames’ when loading ‘ChAMP’
* DONE (ChAMP)